| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15300 |
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| Symbol | aroE |
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| ID | 8386863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1576171 |
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| End bp | 1577034 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644975608 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003133392 |
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| Protein GI | 257055560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.684406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACAG TGGCGCCTCG CAGGGCGGGT GTGCTCGGTT CGCCGGTGCG GCACTCGCTG
TCGCCTGTGC TGCACAACGC CGCATACGCC GCTTTAGGCC TCGACGGATG GCACTACGAC
GCACACGAGG TCGACGACAA GGCCTTGCCG GGCTTCGTGC GGACGCTCGG CGACGAATGG
GTGGGGCTGT CGGTGACCAT GCCCGGTAAG CGGGTGGCAC TGGAGGTGGC CGAGGAGGCC
ACACCGCGGG CGGTGGCCGT GGGAGCGGCC AACACCCTGT CCCGGTTGCC GACCGGAGGG
TGGCGTGCGG ACTGTACCGA TGTGGACGGT GTCGTGGGCG CGTTGCGCGC CGCTGGAGGC
TTCCGCCCCG GGGACGGGAG AACGGCAGTG GTGTTGGGCG CGGGGGGTAC GGCGGCGGCG
GCCGTGGCGG GGTTTCAGGA ACTCGGCCTG GTCGATGTGC ACCTCGTCGT GCGGGAGCCC
GCGCGGGCGC AGGCGACGGC TGGGGCGGCA CGTCGTGCCG GGCTCGACGT CACCGTGCAC
CGGTGGGCGG AGACCGACCT CGCCGCGCTC ACGTCGACGG CGGCCGTACT GGTGAACACC
GTCCCGCCCG ACGCCGTGGC ACCCCACGTG GACGCACTCG CCGCCGTGCC GTGCGTGCTC
GACGTGATCT ACCACCCGTG GCCGACGCCG CTGGCCGAGG CCGTGACGGC GCGGCGCAGC
CGGGTGGCCA CGGGACTGGA CATGCTGTTG CACCAGGCGT TCGGCCAAGT GGAGCAGTTC
ACCGGTCTTC CCGCGCCACG TGAGGTGATG CGGGACGCGT TGCGGGAGGC CACCGGGAAC
ATCCTGCCGT TGCCACTGGA GTGA
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| Protein sequence | MSTVAPRRAG VLGSPVRHSL SPVLHNAAYA ALGLDGWHYD AHEVDDKALP GFVRTLGDEW
VGLSVTMPGK RVALEVAEEA TPRAVAVGAA NTLSRLPTGG WRADCTDVDG VVGALRAAGG
FRPGDGRTAV VLGAGGTAAA AVAGFQELGL VDVHLVVREP ARAQATAGAA RRAGLDVTVH
RWAETDLAAL TSTAAVLVNT VPPDAVAPHV DALAAVPCVL DVIYHPWPTP LAEAVTARRS
RVATGLDMLL HQAFGQVEQF TGLPAPREVM RDALREATGN ILPLPLE
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