| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_15290 |
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| Symbol | |
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| ID | 8386862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1574682 |
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| End bp | 1576163 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975607 |
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| Product | predicted periplasmic solute-binding protein |
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| Protein accession | YP_003133391 |
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| Protein GI | 257055559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.444068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.602564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCAGGC CACCGGTGCG GCGACACAGG CCGTCACCCA ACGACGGTGT CCCGCCGGAC
GACAATCCCA CTGAGATCCT CGAACTCGAC GAGCCCTACG ACGATCTCTA CGACGAGGAG
ATCGAGGGCG ACTACCGGGA TGACGAGGAC TACGACGACT ACGACGATTA CGAGGACTAC
GACGACTACG ACGATCGCGG GTCCGGCTCA CAGGATCGTG CCTCCGACGA GGCCCGGGAC
GGCGTTCGCG ATGACCGCGA CGATCGGGAC GGTCTCAGCC TCCTCGACGA CTCCGACGAG
CGTGAGGACT CGGAGTACGT CGACGAGGAG GACGAGGAGG AACCCGACAC CCAACGTGAG
GGGCGCGTCC GCCGGCTGCT GAAGTGGGCG GCCGTGCTCG CCGTGCTGGT CGGGCTGAGT
GCCGCGGCGT TCTTCGGCGC CCGCGAATTG TTGGGCTTCG GTTACGAGGA CTACGAGGGC
CCCGGTGAGG ACGACGTGAT CCTCCATGTG GAGGAGGGTG ACGTCACCAG TGTCATCGCG
GCCAAGCTCG CGGAACTCGA CGTGGTGGCC AGTCCGGAGG CGTTCGTCAA AGCCGGTGAG
GACGACGAAC GTGTGCTCGG CATCCAGCCC GGTTACTACC AGCTCAAGAC CAAGATGTCC
GGCGAGGCGG CCGTGCGGGC CCTCGTGGCC GAGGACGCCA GGGTCGGACA CCTCCAGATC
AGGGCGGGAA CCAAGCTCTT CGACGTCATC CAGCCCGACG AGTCGGTGAC GCCCGGGGTC
TTCACGCTGT TGGAGCAGGC GTCGTGTGCG CGGCTGAACG GTGAGGACAC GTGCGTGTCG
GCGGAGGAGC TGCGCAAGAC CGCCGATTCC GTGGACCTCA CCGAACTCGG CGTGCCCGAG
TGGGCCGCGG AACACGCCCA GGACGCCCCG AAGGGTCGCA AGCTGGAGGG TCTGATCGCG
CCGGGTGTCT ACGACATCAG GCCGGGCGGA GACGCCGAGG AGGTGCTGTC GCAGGTGTTG
ACGGCCTCGG CCACGAGGTT GGAGGCGGCA GGCCTGCCGG ACGCCGCGGA ACAGACACCG
TACACCCCGT ACGAGATCCT GGTCATCGCG TCGATCGTCG AATTGGAAGG CGTGGAGGCC
GACTTCCCGA ACGTCTCCAG CGTCATCTAC AACCGGGTGG AGGACGGCAT GCGGCTGCAG
ATGGACTCCA CGGTCAACTA CCCGTCGAAA CGGCCGCTTC TGACCACCAC CGAGCAGGAT
CGGCTCAAGG TCACGCCCTG GAACACCTAC GCGATGGCCG GCCTGCCCCA GACACCGATC
GGTGCGCCGA GTCCGCAGGC GATCGAGGCG GCGTTGAACC CGGCGGACAA CGAATACAGG
TACTTCGTCA AGTGCGAGAA GGACGGCCGA TCGTGCTTCA ACGAGGAGTA CGAGGACCAT
CAGGCCGATC AAAAGGATGC GAGAGCTCGT GGTGTCTACT GA
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| Protein sequence | MGRPPVRRHR PSPNDGVPPD DNPTEILELD EPYDDLYDEE IEGDYRDDED YDDYDDYEDY
DDYDDRGSGS QDRASDEARD GVRDDRDDRD GLSLLDDSDE REDSEYVDEE DEEEPDTQRE
GRVRRLLKWA AVLAVLVGLS AAAFFGAREL LGFGYEDYEG PGEDDVILHV EEGDVTSVIA
AKLAELDVVA SPEAFVKAGE DDERVLGIQP GYYQLKTKMS GEAAVRALVA EDARVGHLQI
RAGTKLFDVI QPDESVTPGV FTLLEQASCA RLNGEDTCVS AEELRKTADS VDLTELGVPE
WAAEHAQDAP KGRKLEGLIA PGVYDIRPGG DAEEVLSQVL TASATRLEAA GLPDAAEQTP
YTPYEILVIA SIVELEGVEA DFPNVSSVIY NRVEDGMRLQ MDSTVNYPSK RPLLTTTEQD
RLKVTPWNTY AMAGLPQTPI GAPSPQAIEA ALNPADNEYR YFVKCEKDGR SCFNEEYEDH
QADQKDARAR GVY
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