Gene Svir_15090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_15090 
Symbol 
ID8386842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1550446 
End bp1550823 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID644975587 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003133371 
Protein GI257055539 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCC TTATCCTGCC GCTGCTGTTG ATGCTCATTG TCGCGCTGCC GCTCATCCTG 
AGCACGCGCA AGCAGAAAAA GCTCATGGCC GAGCAGCAGG AGATGCAGAA CAGTCTGACC
GAGGGCGATC GCGTGATGAC GACGTCCGGT CTGTACGCGA CGGTCGCGGA CGCGAGCGAC
GACACCACCA TCGATCTGGA GATCGCCGAG GGCGTGGTGA CGACCTGGCT GCGTCAGGCC
GTGCGTGAAC GGGTCCACCC GGCGGACGCG GACGACAACG ACGTGGAGGC GTTGTCGGAT
CCGGAGTCGG ATTCGGACAC CGCCGAGCAG ACCACGAGCG CGCAGGTCGC GCCCCCGTTG
GAGCACGGCA AGAAATAA
 
Protein sequence
MDGLILPLLL MLIVALPLIL STRKQKKLMA EQQEMQNSLT EGDRVMTTSG LYATVADASD 
DTTIDLEIAE GVVTTWLRQA VRERVHPADA DDNDVEALSD PESDSDTAEQ TTSAQVAPPL
EHGKK