Gene Svir_14960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_14960 
Symbol 
ID8386829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1540581 
End bp1541504 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content68% 
IMG OID644975575 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_003133359 
Protein GI257055527 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGGC AGCGGCTCGT GGAATGGGGC TACGCCACGG GGTGGTTCAT GGTGCCGAAG 
CTGCCCCGGT CACTGGTCAG CACGATGTTC GCGATAGGCG CCGACATCGC CGCCCGCCGT
AACCGCGGCG GAGCCATCCG GTTGCGGCGG AACCTCGCCA GAGTGGTCCC GCAGGCGGGA
CCGGTGGAGC TCGACGATCT CACCCGGCGT GCCATGCGTT CGTACGCGCG GTACTGGCAG
GAGGCGTTCT GCCTGCCGTC CATGGACGTC GACGAGGTGT GCAGCCGCGT CGACGTCACC
GGCATCGAGT ACCTCGACGC CGCGCTGGAA GAGGGGAACG GCGCGGTACT GGCGCTCCCG
CACACCGGCA ACTGGGACGT CGCGGGTGTG TGGCTGGTCG CGCATTTCGG CAACTTCACC
ACGGTGGTGG AGCGGTTACA GCCCGAATCG CTGTACGAGC GTTTCGTCGC CTATCGCGAG
TCGCTCGGCT TCGAGGTGGT ACCCGCCGAC GGGAGCGTGT CGTTCCGTGC GCTGCTGCGT
CGACTGCGAG AGAACAAGGT GGTGTGCCTT GTCGGCGACC GCGACCTGAA CGGCTCGGGT
GTGCCCGTGA CGTTCTTCGG GGAGAGGGCT CGGTTCCCCG CCGGGCCTGC CCGACTGGCG
CTCAGCACGG GTGCCGCCCT GTTGCCCGTG GGCTCCTGGT TCACCGATGG CGGATGGGGG
ATCAGGGTTC ATCCGCGGAT CCGGGTCAGC AGTCGTGAGG AGATCCCCGC CGCCACCCAG
GCGCTCGCCG ACATCTTCGC CGGTGACATC GCCGCCCATC CCACCGATTG GCACATGCTG
CAGCCGTTCT GGCTCACCGA CAGGGAGGGA GCCGACGTCG ACGTCACCAA GGACATCGAC
GTGGACCAAC GGAGGGCGTC ATGA
 
Protein sequence
MSRQRLVEWG YATGWFMVPK LPRSLVSTMF AIGADIAARR NRGGAIRLRR NLARVVPQAG 
PVELDDLTRR AMRSYARYWQ EAFCLPSMDV DEVCSRVDVT GIEYLDAALE EGNGAVLALP
HTGNWDVAGV WLVAHFGNFT TVVERLQPES LYERFVAYRE SLGFEVVPAD GSVSFRALLR
RLRENKVVCL VGDRDLNGSG VPVTFFGERA RFPAGPARLA LSTGAALLPV GSWFTDGGWG
IRVHPRIRVS SREEIPAATQ ALADIFAGDI AAHPTDWHML QPFWLTDREG ADVDVTKDID
VDQRRAS