| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_14570 |
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| Symbol | |
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| ID | 8386790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1503533 |
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| End bp | 1506349 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644975536 |
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| Product | translation initiation factor 2 |
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| Protein accession | YP_003133324 |
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| Protein GI | 257055492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00182457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.54145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGCA AAGCCCGCGT ACATGAGCTC GCGAAAGAGC TCGGTGTCAC GAGCAAGGAA
GTACTCGCCA AGCTGAAGGA GCAGGGCGAG TTTGTGAAGT CCGCGTCATC CACCGTCGAG
GCTCCCGTGG CCCGACGGCT GCGTGACGCG TTTTCGAAGA AGGACGATCA GCAGGCGGAG
AAGGCTCCCG ATAAGGGCAA GCCCTCGATG GTGAGGTCGA CGACGCCGAG GCGTGGCGAG
ACCGGTACTC CCACACCGAA GCCGGCGCCG CCGCAGCCGC AGGCGGGGCA GCCTCAGGCG
AAGCCCGAGC AGCCACCGGT GCCGAAGCCG GGGCCACGGC CGGTGCCGAA GCCCGGTCCG
AAGCCGGGGC CGATCCCCAA GCCGGGTGAG CAGGCTCCGG CGGCGAAGGC GACGCCGAAG
GATCAGCAGG GTTCCGTCGT TCCGCCGAAG CCGCAGGGTC CGAAGCCCGG TCCGAAGCCG
GGTCCGCGCC CGCCACGGGT CGGCAACAAC CCGTTCGGTG TGGGATCCGG TGCTCCCGCT
CCGCGTCCTG CGCCGCCACG TCCTGGGGGC GGGCAGAGTG ATCGCGCTCC GCGTCCGGGT
GGCGAGCGTC CGGCGAGCCC CAAGAGCGGT GCTCCCAGGC CGCATCCGGG CAACATGCCG
CCGCGTCCCA ACCCCGGCAT GATGCCGCCG CGTCCGCCGC GTCCGGCCGG CGGCCCCGGT
GGGCGTAGCG GTGGTCCCGG TGGCCGCGGC GGCCCCGGTG GTCGTGGTGG AGCTCCGCGT
ACCGGCGGCG GTTTCCGCGG TGGACCGGGC GGTGGTGGCG GCGGCTTCCG TGGCGGTCCC
GGTGGCGGCG GTGGTTTCCG TGGCGGCCGG GGTGGTCCCG GTGGTCGTGG TGGAACGGCC
GGTGCCTTCG GGCGTCCGGG CGGTCCCTCG CGCAAGGGCC GTAAGTCGAA GCGGCAGAAG
CGCCAGGAGT ACATGGAGAC CATGCAGGCG CCGTCGGTCG GCGGCGTGCG TCTGCCGAAG
GGCAACGGCG AGACCATCCG GTTGCCGCGT GGTGCGTCGT TGACCGACTT CGCGGAGAAG
ATCAACGCGA ACCCGGGCTC CCTGGTGCAG GTGCTCTTCC ACCTCGGTGA GATGGTCACC
GCGACGCAGT CGGTCTCCGA GGACGTGCTG GAACTGCTCG GCTCGGAGAT GAACTACAAC
GTCCAGGTGG TCAGCCCCGA GGAGGAGGAC CGCGAGCTGC TCGAGGCGTT CGACATCAAC
TTCGGTACGG ACGCCGGTAG CGAGGAGGAC CTGCGGCCCA GGCCGCCGGT GGTGACCGTC
ATGGGTCACG TCGACCACGG TAAGACCAGG TTGCTGGACA CCATCCGGCA GACGAAGGTC
GGTGAGGCCG AGGCCGGTGG CATCACCCAG CACATCGGTG CCTACCAGGT CAAGACGGAG
GTCGACGGCG AAGAGCGGCT GATCACCTTC ATCGACACCC CGGGTCACGA GGCGTTCACC
GCCATGCGTG CCCGTGGTGC GCAGGCCACC GACATCGCCG TGATCGTGGT CGCGGCCGAC
GACGGTGTGA TGCCGCAGAC GGTGGAGGCG ATCAACCACG CGCAGGCCGC CAAGGCGCCC
ATCGTGGTCG CGGTCAACAA GATCGACGTC TCGGGCGCGA ACCCGGCGAA GGTTCGCCAG
CAGCTCACCG AGTACGGCCT GGTGGCCGAG GAGTACGGCG GCGACACGAT GTTCGTCGAC
ATCTCGGCCA AGCAGGGCAC GAACATCGAC GGGCTGCTCG AGGCGATCGT GTTGACCGCC
GACGCGGCGC TGGACCTCCG GGCGAACCCG GACATGGAGG CCCAGGGGGT GGCCATCGAG
GCGCACCTCG ACCGCGGCCG CGGTCCGGTG GCCACGGTGC TGGTGCAGCG CGGAACCCTG
CGAGTGGGCG ACTCGGTCGT CGCGGGCGAC GCCTACGGTC GAGTGCGACG CATGGTGGAC
GAGTACAACC GGGACGTCAC CGAGGCGAAG CCGTCGCGGC CGGTCCAGGT CATCGGCTTC
ACATCGGTGC CGAGGGCCGG TGACACGTTC CTCGTCGTCG AGGAGGACCG GGTGGCCCGG
CAGATCGCCG AGCGCCGCCA GGCTCGGATC CGCAACGCCG AGAACGCCGC CAGGCGCAAG
CGTGTCAGCC TGGAGGACCT GGACTCCGCG TTGAAGGAGA CCAACACCCT CAACCTGATC
ATCAAGGGCG ACAACTCGGG TACCGTCGAG GCGCTCGAAT CGTCCCTGAT GCAGATCGAC
GTCGGCGACG AGGTGGAGCT CAACATCGTC CACCGCGGTG TGGGTGGTGT CACCGAGAGC
GACATCGACC TCGCCACGGC GTCCGACGCG GTCGTGATCG GGTACAACGT GCGTGCGCAG
GGCAAGGCGA CCGAACGCGC CACGCGCGAG GGTGTCGACG TCCGGTACTA CACGGTGATC
TACCAGGCGA TCGAGGAAAT CGAGCAGGCC CTGAAGGGCA TGCTCAAGCC GGTGTACGAG
GAGGTCGACC TCGGTAGGGC TGAGGTCCGT GAGGTGTTCA AGTCCTCGAA GGTCGGCACC
ATCGCCGGTT GTCTGGTCAC GTCGGGTGAG ATCCGGCGTA ACTCCAAGGC ACGCCTGCTG
CGTGACGGCG TGGTTGTCGG GGAGAACCTC CCGGTCAGCT CGCTGCGGAG GTTCAAGGAC
GACGTCGTGG AGGTCCGCGA GGGCTTCGAA TGCGGTCTCA CGCTCGGCAA GTTCTCCGAC
ATCAAGGTCG GTGACGTGAT CGAGACGTAC GAGCTCCGCG AGAAGCCGCG CGAGTGA
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| Protein sequence | MAGKARVHEL AKELGVTSKE VLAKLKEQGE FVKSASSTVE APVARRLRDA FSKKDDQQAE
KAPDKGKPSM VRSTTPRRGE TGTPTPKPAP PQPQAGQPQA KPEQPPVPKP GPRPVPKPGP
KPGPIPKPGE QAPAAKATPK DQQGSVVPPK PQGPKPGPKP GPRPPRVGNN PFGVGSGAPA
PRPAPPRPGG GQSDRAPRPG GERPASPKSG APRPHPGNMP PRPNPGMMPP RPPRPAGGPG
GRSGGPGGRG GPGGRGGAPR TGGGFRGGPG GGGGGFRGGP GGGGGFRGGR GGPGGRGGTA
GAFGRPGGPS RKGRKSKRQK RQEYMETMQA PSVGGVRLPK GNGETIRLPR GASLTDFAEK
INANPGSLVQ VLFHLGEMVT ATQSVSEDVL ELLGSEMNYN VQVVSPEEED RELLEAFDIN
FGTDAGSEED LRPRPPVVTV MGHVDHGKTR LLDTIRQTKV GEAEAGGITQ HIGAYQVKTE
VDGEERLITF IDTPGHEAFT AMRARGAQAT DIAVIVVAAD DGVMPQTVEA INHAQAAKAP
IVVAVNKIDV SGANPAKVRQ QLTEYGLVAE EYGGDTMFVD ISAKQGTNID GLLEAIVLTA
DAALDLRANP DMEAQGVAIE AHLDRGRGPV ATVLVQRGTL RVGDSVVAGD AYGRVRRMVD
EYNRDVTEAK PSRPVQVIGF TSVPRAGDTF LVVEEDRVAR QIAERRQARI RNAENAARRK
RVSLEDLDSA LKETNTLNLI IKGDNSGTVE ALESSLMQID VGDEVELNIV HRGVGGVTES
DIDLATASDA VVIGYNVRAQ GKATERATRE GVDVRYYTVI YQAIEEIEQA LKGMLKPVYE
EVDLGRAEVR EVFKSSKVGT IAGCLVTSGE IRRNSKARLL RDGVVVGENL PVSSLRRFKD
DVVEVREGFE CGLTLGKFSD IKVGDVIETY ELREKPRE
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