Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_14230 |
Symbol | |
ID | 8386756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1467003 |
End bp | 1468304 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975502 |
Product | hypothetical protein |
Protein accession | YP_003133290 |
Protein GI | 257055458 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.413871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACG AATTTTGGGA TCATTCCGAG ATCCAGCAGG CTGCACGAGA GCGGCACATC GGTCGTTTGC TCCGCGCGTA TCGCACGCTC CAGCGGCCGA GGATGACGCA GTTACAGTTG GCCGGCTGGC TGGGGATCGA CCAGTCGAAC CTGTCCCGAC ACGAACGGGC GGCTCGACCC ACGGTCGACC TGGACAAGTT GATGCAATGG GCGAGCATCC TGCGGATTCC GCAACGTCTT TTGTGGTTCC AGCTCCATCC GACCCACACA TCTGAGCCGG CCCCGGCTTC GCCGACGCTC GCCACCGTCG AGGAGAGTGG AGACGTTGAC GTGCACCGAC GACAGTTCCT CCGTGCTTCG GGGATGACAG CGCTCGGCAT GGTCTGCAGC GGTACCGCGC AGGCCGTTCC CAGCGGCTCG ACGGTGGAGG AGATCCGCCG TATGACGGCG GGGTTCCGCG CGCAGGACAA CAGTTTCGGC GGAAGCTACG GTCGCAGTGC GTTGGCGGCC TATTTCAGTC GCACGGTGGA ACCGTTGTTG ACTTCCCGGG CGAAGCCGCC CCTGCTCGTC GCCGCCGCCG AAATGCAACA GGTCGCAGGG TGGATGGCCT ATGACGTCGG GCAACCCGAG ATCGGGCGAC GACATCTTCG CGAGGCACTG CGACTCTGTC AACGGGCGGG CGAGGAAGCG CTCGCCGCGG AGATGCTCGC CGGCATGTCG CACCAAGCGG CGTTCCTGGG GGCCGGTGAC TCGGCCGTCG ACCTCGCCTT GGCGGCCCAG CAGATCGCCG GACGTGTGCA CCTGCCCGCC CTGGCCGCAG AGATCAACGT GCTGGAGGCC CATGGGTACG CCATCAAAGG GGACAGGGCC GAATGTCTGG CGGCTTTGCA CCACAGTGAA CAGGCGTTCG AGCACGCCGA CGGTGATCGA CCGGACTGGT TGCGCTACTT CGACCGTTCC TACATGGCCG CGAAGACCGC ACACGTCCTG CGGGACCTCG GGGCTTCGGC GGAAGCCGAG GCGTATGCGC GGGAATCCCT GCAGATGGCC GAGGGATACG AACGTGGGCG GCTTTTCAAC ACGGCTCTGC TCGCCTCGAT CCTGGCCGAT CAACGGCGGG TGGAGGAAGC CTGCGCCGAG GGCGCTCGGG CGGTGTCGAT GCTCCACCGC GTCCGTTCTG TGCGCGCTCT CGCCTACCTG TCCGATTTGG CGCGCCGCCT CGCCCCGTTC GCCCGCACCA CGTCGGTGAA GCACCTGTAC GACCGGTTCC ACAGTGTCGG GGTCGTCACC CCGCGAATGT AG
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Protein sequence | MPDEFWDHSE IQQAARERHI GRLLRAYRTL QRPRMTQLQL AGWLGIDQSN LSRHERAARP TVDLDKLMQW ASILRIPQRL LWFQLHPTHT SEPAPASPTL ATVEESGDVD VHRRQFLRAS GMTALGMVCS GTAQAVPSGS TVEEIRRMTA GFRAQDNSFG GSYGRSALAA YFSRTVEPLL TSRAKPPLLV AAAEMQQVAG WMAYDVGQPE IGRRHLREAL RLCQRAGEEA LAAEMLAGMS HQAAFLGAGD SAVDLALAAQ QIAGRVHLPA LAAEINVLEA HGYAIKGDRA ECLAALHHSE QAFEHADGDR PDWLRYFDRS YMAAKTAHVL RDLGASAEAE AYARESLQMA EGYERGRLFN TALLASILAD QRRVEEACAE GARAVSMLHR VRSVRALAYL SDLARRLAPF ARTTSVKHLY DRFHSVGVVT PRM
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