| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13800 |
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| Symbol | |
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| ID | 8386716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1422370 |
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| End bp | 1424343 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975464 |
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| Product | DNA primase |
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| Protein accession | YP_003133254 |
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| Protein GI | 257055422 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0288236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.281432 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCGG GTGCGGACAC GCCGGCGAGA CCGCGGAACC CGGTGTTCTA CAGTGAGCGA
GTGGCGGGAC GGATCCGGGA AAGCGACATC GCGCAGGTGC GTGAACGCAA TCGGATCGAC
GAGATCGTCG GTGAATACGT GGCGTTACGA CGCGCCGGTG GCGGGGCTTT GAAGGGCTTG
TGCCCTTTCC ACGAGGAGAA GACACCCTCG TTCAACGTGC GGCCCACGCA CGGCACCTTC
CATTGCTTCG GCTGCGGTGA AGGCGGCGAC GTCATCAAGT TCGTCATGCA GATCGAGCAC
CTCGGCTTCG TCGAAGCCGT CGAACGGCTC GCCGACCGCA TCGGACTGCA GCTGACCTAC
GAGGGAGGCG GCAGTAGCGT CCGCCGGGAC CGTGGTACCC GCCTGCGACT GGTCGAGGCG
CACAAGGCCG CCCAGGCGTT CTACGCCGAA CAGCTCACCA CTCCGGAGGC CGAGGCCGCG
CGCGCGTTCC TCACCGAACG GGGGTTCGAC CAGAGCACGT GGACGAAGTT CGGTTGCGGG
TACGCCCCGG CGGGATGGGA CCGACTCACG AAACACCTGC TGCGCAGCGG TTTCGAGCTG
TCCGAGCTCT ACAGGGCACA GTTGTCCAAG GAGGGCAGGC GCGGTCCGAT CGACCGGTTC
CACCGCAGGC TCGTGTGGCC GATCAAGGAC CGCGGTGGGG ACGTCGTCGG GTTCGGTGCG
CGACGCCTGT TCGACGACGA CCCGATCCAG GCCAAATACC TCAACACCAG CGAAAGCCCC
ATCTACAAGA AGTCGCAGGT GCTGTTCGGC CTCGACCAGG CCAAGCGGGA GATCGCGCGA
CGACACCAGG TGGTGGTCGT CGAGGGGTAC ACCGACGTGA TGGCCATGCA CGCCGCCGGG
GTGCCGACGG CGGTGGCGAC GTCGGGTACG GCGTTCGGCG AGGACCACAT GCGCGTGCTG
CGGCAGCTCA TGATGGACGA CGACGCCTTC CGCGGAGAGG TGATCTTCAC CTTCGACGGC
GACGAGGCGG GCCAGAAGGC CGCGCTCAAG GCGTTCGAGG GGGACCAGAC GTTCGCGGGC
CAGACCTACA TCGCGATCGC GCCGGACGGG ATGGACCCGT GCGAGCTGCG CCTGGCCAAG
GGTGATGCGG CCGTGCGTGA TCTGGTGGCG CGGCGCATCC CGCTGTTCGA GTTCGCCATC
AAAAGCCTGC TCGCCTCCTA CGACCTCGAT TCGGTGGACG GCCAGGTGGC CGCGTTACAG
CGGACCGTGC CGCTGGTCGC GCAGATCAAG GACCGTGCCA AGCGTGACGG CTACGCCACC
AAACTGGCGT GGTGGGTCGG CTGGCAGGAC GAGGCCATGG TGGTGCGGCG GGTGCGGGAG
ACCGCCGACG GCGCGCCGGC GAGGACGAAC GGCACTCGGC GTTCCTCCGC ACGCGCCGGT
CGGGCCGGTG GTGCCCGCGG CAACGGCACG GGCGGACAGT TGGAACGTCC CGACCCGAGG
AACCCCGACC TGCGGGCGCA GCGCGAGGTG TTGAAGGCGG CGCTGCAGGA GCCCGCGCTC
GCCGGCCCCG AGTACGACGC GTTGCCGGAG GACGCCTTCA CCCATCCCGC CTATGTGGGG
GTGCATCGGG CGCTGCTCGC GGCCGGCGGC ACCGGCAGTG GACTCAGCGG GTCCGCGTTG
ATCGAGGCCG CGTCCGCACA CGCCAGCGAC CGCACCGTCG TCTCGTTGCT GTCGGAGTTG
GCGGTGGAGC CGTTGCAGGC CAAGGACGAC GCGGATGTCC GTTACGTGTC GAGTGTGCTC
GCGGCGGTGC AGGAGAACCT CGTCGGCCGT CAGATCGGGG AACTCAAGTC GCGGTTGCAG
CGGTTGTCCC CGGTGGACGC CGCCGAGGAG TATCGTGCCC TGTTCGGTGA CCTCGTGGCG
TTGGAGCAAT ACCGTAAGGC GCTACGGGAG CAAGCCATGG GCGGATGGGG CTGA
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| Protein sequence | MDPGADTPAR PRNPVFYSER VAGRIRESDI AQVRERNRID EIVGEYVALR RAGGGALKGL
CPFHEEKTPS FNVRPTHGTF HCFGCGEGGD VIKFVMQIEH LGFVEAVERL ADRIGLQLTY
EGGGSSVRRD RGTRLRLVEA HKAAQAFYAE QLTTPEAEAA RAFLTERGFD QSTWTKFGCG
YAPAGWDRLT KHLLRSGFEL SELYRAQLSK EGRRGPIDRF HRRLVWPIKD RGGDVVGFGA
RRLFDDDPIQ AKYLNTSESP IYKKSQVLFG LDQAKREIAR RHQVVVVEGY TDVMAMHAAG
VPTAVATSGT AFGEDHMRVL RQLMMDDDAF RGEVIFTFDG DEAGQKAALK AFEGDQTFAG
QTYIAIAPDG MDPCELRLAK GDAAVRDLVA RRIPLFEFAI KSLLASYDLD SVDGQVAALQ
RTVPLVAQIK DRAKRDGYAT KLAWWVGWQD EAMVVRRVRE TADGAPARTN GTRRSSARAG
RAGGARGNGT GGQLERPDPR NPDLRAQREV LKAALQEPAL AGPEYDALPE DAFTHPAYVG
VHRALLAAGG TGSGLSGSAL IEAASAHASD RTVVSLLSEL AVEPLQAKDD ADVRYVSSVL
AAVQENLVGR QIGELKSRLQ RLSPVDAAEE YRALFGDLVA LEQYRKALRE QAMGGWG
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