| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13650 |
|---|
| Symbol | |
|---|
| ID | 8386701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1407038 |
|---|
| End bp | 1407832 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975449 |
|---|
| Product | Undecaprenyl pyrophosphate synthetase |
|---|
| Protein accession | YP_003133239 |
|---|
| Protein GI | 257055407 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.597201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.462192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTAC GGGAGCCTGA TCCTCACCCC TCAGGTGCCA AGCCACCGAA CATCCCGCCG
GAGCTGGTCC CGAAACACGT GGCCCTGGTC ATGGACGGTA ACGGCCGGTG GGCTAACCAG
CGGGGACTGC CCCGAATCGA GGGACACAAG CGCGGCGAGG CCGTAATGAT CGACGTCGCC
AGCGGCGCGG TGGAGCTCGG CATCAAGTGG CTGTCGGTGT ATGCGTTCTC GACGGAGAAC
TGGAAACGCA GCCCCGACGA AGTGCGGTTT TTGATGGGCT TCAACCGCGA CACCATCCGC
AGGCAGGTGG ACTACCTGGG GTCGATCGGA GTACGCATCC GCTGGGCTGG TCGCGCTCCG
CGGCTGTGGC GCAGCGTGAT CAAGGAGCTG CGGGATGCCG AGGAGAAGAC CAAGCACAAC
ACGCGGATGA ACATGACGAT GTGCGTCAAC TACGGGGGGC GCGCCGAACT CGGGGACGCC
GCGCGACGGA TCGCGCAACT CGCGGCCGCG GGGAAGATCG ATCCGGACAA AGTGGATGAT
CGGATGCTGG CGAAGTATCT GTATCAGCCC GAGATGCCGG ACGTGGACCT TTTCCTGCGC
CCCTCGGGTG AGCTGCGGAC CTCGAATTTC CTGTTGTGGC AGTCCGCGTA CGCCGAGTTC
GTCTTCCAGG ACACGCTCTT TCCGGATTTC GATCGCAGGA AGTTGTGGGA GGCGTGCCTG
GAGTACGCCA AGCGCGACCG TCGCTTCGGG GCCGCGGTGG ACGCCGCCCG CCCGAACGGG
GGTGGCTCGA CATGA
|
|---|
| Protein sequence | MELREPDPHP SGAKPPNIPP ELVPKHVALV MDGNGRWANQ RGLPRIEGHK RGEAVMIDVA
SGAVELGIKW LSVYAFSTEN WKRSPDEVRF LMGFNRDTIR RQVDYLGSIG VRIRWAGRAP
RLWRSVIKEL RDAEEKTKHN TRMNMTMCVN YGGRAELGDA ARRIAQLAAA GKIDPDKVDD
RMLAKYLYQP EMPDVDLFLR PSGELRTSNF LLWQSAYAEF VFQDTLFPDF DRRKLWEACL
EYAKRDRRFG AAVDAARPNG GGST
|
|---|
| |