| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_13180 |
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| Symbol | |
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| ID | 8386654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1354787 |
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| End bp | 1355428 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644975402 |
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| Product | sortase (surface protein transpeptidase) |
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| Protein accession | YP_003133192 |
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| Protein GI | 257055360 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.422261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACG CGACGCTGCG CCGTCCCCGC CTGTCCGTTC GTCGGCTGGC GGGGCTGGCG
GCGTTGGCCT TCCTCCTGAT CACCGGTTGC AGCGGTCCAC AAGACACGAT CGCCGGACAC
GCCGAGGCCG TGGAGCAACA GACCGGTGTC AGTGTCGATG TCGATGAGCA GGCCACGCTG
CCGGCTTCCC TGCCGATACG GTTGCGCATC CCCGACATCG GGGTGGATAC CGATGCTTTC
GTCGGCCTCG GACTGGAGCC GGACAACACC ATGGAGGTCC CCGAAGGCGC GGAAGTCGTG
GGGTGGTACG AGGAATCCCC GACTCCCGGT GAGCGTGGCC CGTCGGTCCT GGCCGCTCAC
GTCGACTGGC AGAACCAGAA AGGCGTCTTC TTCGATCTTC GCAATCTCGA AGCAGGCGCC
AATGTGGTCG TGGACCGTGC CGACGGGACC ACCGTGTTGT TCAAGGTCAC CGAGGTCGAG
CAGTATCCGA AGGACGAGTT CCCCACCGAG AGGGTCTACG GGGACACCGA GGGTGCGGAA
CTACGGTTGA TCACGTGCGG CGGTTCCTTC AACCGCACCG TGCAGAGTTA CCACGACAAC
GTCATCGCCT ATGCCACGAT GGTGGACGCT GCTGTGAGCT AG
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| Protein sequence | MRDATLRRPR LSVRRLAGLA ALAFLLITGC SGPQDTIAGH AEAVEQQTGV SVDVDEQATL
PASLPIRLRI PDIGVDTDAF VGLGLEPDNT MEVPEGAEVV GWYEESPTPG ERGPSVLAAH
VDWQNQKGVF FDLRNLEAGA NVVVDRADGT TVLFKVTEVE QYPKDEFPTE RVYGDTEGAE
LRLITCGGSF NRTVQSYHDN VIAYATMVDA AVS
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