| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12900 |
|---|
| Symbol | |
|---|
| ID | 8386626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1328937 |
|---|
| End bp | 1329281 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644975374 |
|---|
| Product | anti-anti-sigma factor |
|---|
| Protein accession | YP_003133164 |
|---|
| Protein GI | 257055332 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG ACGCGGAACA GCGGTCGGGC GACGTGGTGC TCGCACACGT CTCCGGTGAG
GTCGACCTCC TGTCCGCACC CGAATTACGG CAGTGGGTCG AGCAGAACAC GTCAGCATCC
GGCAGATTGG TCCTCGATCT CGACGGGGTC GGTTTCCTCG GCTCGGCCGG TCTTTCCGTA
CTGGCCGAAC TGTCTGAGAA AGCCGCCCAG GACAAGTTGG CGTGGGCGAT CGTCGCCACC
AAACGCGTCG TCCTGCGCCC ATTGGAGGCC ACGGGCCTCG TCTCGCAGAT GCCGGTGTAC
GAGAACGTCG CCGACGCGGT GAACAGCCTC TCCGGAGCCA AGTGA
|
|---|
| Protein sequence | MRIDAEQRSG DVVLAHVSGE VDLLSAPELR QWVEQNTSAS GRLVLDLDGV GFLGSAGLSV
LAELSEKAAQ DKLAWAIVAT KRVVLRPLEA TGLVSQMPVY ENVADAVNSL SGAK
|
|---|
| |