Gene Svir_12500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_12500 
Symbol 
ID8386587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1293744 
End bp1294058 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content64% 
IMG OID644975336 
ProductLSU ribosomal protein L21P 
Protein accessionYP_003133126 
Protein GI257055294 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.621889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGCGT ATGCAGTCGT CAAGACCGGC GGCAAGCAGT ACAAGGTCGC CGTCGGCGAT 
GTCGTCGAGG TCGAGAAGCT CGACGGCGAG CCGGGCACCG AGCACACCCT TCCCGCCGTG
ATGGTGGTCG ACGACGGCAA GGTCACGACG GACGCTGACG CGCTGGCGAA GGTCTCGGTC
ACGGGCAAGA TCGTCGAGCA GATCAAGGGC CCGAAGATCC GTATCCACAA GTTCAAGAGC
AAGACCGGCT ACCACAAGCG TCAGGGTCAC CGGCAGCGGC TGACCCGCCT CGAGGTCACC
GGCATCAACA AGTAA
 
Protein sequence
MSAYAVVKTG GKQYKVAVGD VVEVEKLDGE PGTEHTLPAV MVVDDGKVTT DADALAKVSV 
TGKIVEQIKG PKIRIHKFKS KTGYHKRQGH RQRLTRLEVT GINK