Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_12500 |
Symbol | |
ID | 8386587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1293744 |
End bp | 1294058 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644975336 |
Product | LSU ribosomal protein L21P |
Protein accession | YP_003133126 |
Protein GI | 257055294 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0261] Ribosomal protein L21 |
TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.621889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGGCGT ATGCAGTCGT CAAGACCGGC GGCAAGCAGT ACAAGGTCGC CGTCGGCGAT GTCGTCGAGG TCGAGAAGCT CGACGGCGAG CCGGGCACCG AGCACACCCT TCCCGCCGTG ATGGTGGTCG ACGACGGCAA GGTCACGACG GACGCTGACG CGCTGGCGAA GGTCTCGGTC ACGGGCAAGA TCGTCGAGCA GATCAAGGGC CCGAAGATCC GTATCCACAA GTTCAAGAGC AAGACCGGCT ACCACAAGCG TCAGGGTCAC CGGCAGCGGC TGACCCGCCT CGAGGTCACC GGCATCAACA AGTAA
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Protein sequence | MSAYAVVKTG GKQYKVAVGD VVEVEKLDGE PGTEHTLPAV MVVDDGKVTT DADALAKVSV TGKIVEQIKG PKIRIHKFKS KTGYHKRQGH RQRLTRLEVT GINK
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