| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_12450 |
|---|
| Symbol | |
|---|
| ID | 8386582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 1282678 |
|---|
| End bp | 1285479 |
|---|
| Gene Length | 2802 bp |
|---|
| Protein Length | 933 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975331 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133121 |
|---|
| Protein GI | 257055289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.277877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.37002 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTGC CCTCCGCATG GGACACCGTG CCCGTGTTCG GCGCCCATGT GCAGATCAAC
GGTGAACCCG CACAAGGAAG CATCACCTTC ACCGCCCGGC AGCGCCTGCA CTCCTACGCC
GACGAAATCG CTATCCTGCC CGGTCCCATC ACGGCCTTTT TGGGCCAGGA CGGGCGTTTC
GAGATCGCGC TGCCCACCAC CGATGACCCG GACATCACGC CGAGCGGGTG GGCGTGGGAG
GTCACCGAGC AGTTCGGGCC TGAGGACCGG CCGACCTACC AGCGCACCTA CATCATGCTC
GCCCCGGCAG GCGATCCGAT CGACCTGACC AACATTGAAC CGGCGGTGCC ACCGGAGGAA
GCGCCGGTGG TGCCGTGGAC CTCAGTGGCG GGCAAAACGC CGAATGCCGA AGGCAACATC
GTGTTGTCCT TCGGCGATTT GGTGGGCACG GTGCCCACCG AGGCCATTCC GGCCATCGCG
CTCACCGATG TCCACACCGT GGACAGTGAA GCGGCCATGC TCGCGCTGGA CGCCCAGCGT
GGGGACATGG CGATCCGGCT GGACGAGTCA CAGTCGTACG TGCTGGCCGC TGACGACCCC
ACACAGGCCG CGTCGTGGGT GCGGCTGGCT ACCCCACCCG ACGTGGTGTC CTCGGTGGCT
GGACGCACCG GTCACGTCAT GCTGACCAAG GCCGATGTGG GGCTGGACCA GGTGGACAAC
ACTTCCGACT TGGCCAAGCC GGTGTCGGCA GCCACTCAGG ACGCCCTCGA CGCCAAGGTG
CCCACCACCC GCACCGTGGC CACCGGCACC GGGTTGACCG GAGGCGGGGA CCTGGCGGCC
GACCGAACCC TGTCCGTGGC GTTCGGCACC ACGGCGGGCA CCGTGGCAGC CGGGGACGAC
GAGCGCCTGT CGGGCAACCT GAAAGCGGCA GCCAACCTGG CCGATGTGGC CAGCGCCGAG
ACCGCCCGCA CGAACCTCGG CCTCGGCGAC GCGGCCACCC GCGACGTGGG CACCACGGCG
GGCACCGTGG CAGCCGGGGA CGACCCCCGT TTCGCGGGCG GCGAAGCCAT TCAGGACCAG
GTGGACGACC ACGCCGACAC ACTCGCCCAG CACGCCGCCG CACTCGGCGC GCCCGGCTAC
GGCACCGTCC GCCACAGCAC GACCCGCCCG TTCGGCCTCG ACGCCCAACA CGCCGCGTTC
CCCGGCGCGG CGCGCCTGCC CGACGGATCG CTGTACCTGG TGTGGCGTCA GGGGTCCAAC
CACTGGACCA ACCGCGATGG GTCGTTGCTC GCCTCCCGAA GCCGCGACCT CGGCCGCACC
TGGACTCAGC CGGTCACGAT CGTGCCGTAT GCGGGCGACG GCGTGGACTA CCGAGACCCC
TCGGTGTCGG TGTCCCGCGA CGGCACCCGC ATGTATCTGA CCTACTTCAA GGGCACCTCG
GCCGTGGCCG CTGCCGGGGC GTTCCTGCGT GTCTCCACCG ACCAGGGACA GACGTGGGGA
CCTGAGGTGC GCATGGACAC CCTGCCCTAT GCCGCGATCT GCGCGCCGCT GGTCGAACTG
GGCACCGGTG ACCTACTCGG GTTCCTCTAC GGCCACAGTG GCTCGGAGAC TCAGGACTCC
GTGTGGCTGG TGCGCTCGTC CGACCAGGGG CAGACGTGGC AGGCACCCGT GCGCCTGGTC
AACGGCGTCA CCGACGCCCG CAACTACCAG GAGCCGTGGG CGGTGCAGCG CGGTGATCAG
CTCGTGGTGT TGTTCCGGTG GGGTAGCGGC GACGGTATCG GCACCATCGC GGCCACCAAC
GCCGCCGCGA CGACGTGGGG CACTCCGGGG CGTCGGTTCG GCGGGAGTGG CCGGCCGTCT
GCGGTGTGGC TGTCCACCGG AACCATGGTG GTGACCTACC GCGCTTCCAC GGGCGGCGCC
CTGGTCTACC GCGCGAGTCG CGATGGCGGG GTGTCGTGGG ACGCCGAGCG GTTGCTGTCC
CGCCCACCCA CGGGCGGCAT GATGACCTAC GCCTCACCCA TCGAGACGTT CACGGGAGAG
GCATTCTGCC CGTACACCGA GGAAGACTCC GCGGGCGTGG TGTCCCGTCT GTATCTGTCC
TACCTGTCCG AAGGCGGCTC CTACACGCCA CTCGGGCCGA CCCCAGACAC CCGTCTCGCC
GTGCCCACGC GCGTCGATGA CGTGCTGTAC GCGACGGAGT TCAACCAGCC GGACGGGCCA
CCTCCGCCCG AGTGGACCGT GTTCAGCGGG TCCCCAGCGA TCCGGGGTGG CCGCCTGGTA
TCTGGCACGC AGGACACCAC CCCGGAACGA CTGGTGGTGG ACGTGGGCAC GGCTGACGCC
ACGGTGGAGG CACACCTAGC GTTCACAGGT GGCAGCACAA CCCAGATCGG CTATGGGTTG
ATCTTGCGGT ATGTCGATCC GGGCAACTTC CTGATGGTGG CGGCCGAAGT GGCCACGGGG
ACCGGAGTGG ACCTGCACCC CACGCAGCTC AACGTCTACC GCAACTACCA AGGCACCCTC
TACAGGTGGT ACTCATCCAC GTGGAACACC GCGTTCACGG AACCGACTGT GACGCTCGGG
ACCGCCCCCA ACCCGGCGTT GTACTCCACC AGCTACAACC GGCTGAAAGC TGAGATGCGG
GGCCGCGTGA TCATCTTCTA TATCAACGAC GTCATGGTGC ATTGGATGAA CAACAGCACC
GACGCGACCA CGCCTCTTGG GACTGCCACA AGGCATGGCA TCGTGCTCAA TGCCCCGGTC
GGTCAGCAAC AGTATTGCAG GAGGTTTACC ATGATCGGCT GA
|
|---|
| Protein sequence | MPLPSAWDTV PVFGAHVQIN GEPAQGSITF TARQRLHSYA DEIAILPGPI TAFLGQDGRF
EIALPTTDDP DITPSGWAWE VTEQFGPEDR PTYQRTYIML APAGDPIDLT NIEPAVPPEE
APVVPWTSVA GKTPNAEGNI VLSFGDLVGT VPTEAIPAIA LTDVHTVDSE AAMLALDAQR
GDMAIRLDES QSYVLAADDP TQAASWVRLA TPPDVVSSVA GRTGHVMLTK ADVGLDQVDN
TSDLAKPVSA ATQDALDAKV PTTRTVATGT GLTGGGDLAA DRTLSVAFGT TAGTVAAGDD
ERLSGNLKAA ANLADVASAE TARTNLGLGD AATRDVGTTA GTVAAGDDPR FAGGEAIQDQ
VDDHADTLAQ HAAALGAPGY GTVRHSTTRP FGLDAQHAAF PGAARLPDGS LYLVWRQGSN
HWTNRDGSLL ASRSRDLGRT WTQPVTIVPY AGDGVDYRDP SVSVSRDGTR MYLTYFKGTS
AVAAAGAFLR VSTDQGQTWG PEVRMDTLPY AAICAPLVEL GTGDLLGFLY GHSGSETQDS
VWLVRSSDQG QTWQAPVRLV NGVTDARNYQ EPWAVQRGDQ LVVLFRWGSG DGIGTIAATN
AAATTWGTPG RRFGGSGRPS AVWLSTGTMV VTYRASTGGA LVYRASRDGG VSWDAERLLS
RPPTGGMMTY ASPIETFTGE AFCPYTEEDS AGVVSRLYLS YLSEGGSYTP LGPTPDTRLA
VPTRVDDVLY ATEFNQPDGP PPPEWTVFSG SPAIRGGRLV SGTQDTTPER LVVDVGTADA
TVEAHLAFTG GSTTQIGYGL ILRYVDPGNF LMVAAEVATG TGVDLHPTQL NVYRNYQGTL
YRWYSSTWNT AFTEPTVTLG TAPNPALYST SYNRLKAEMR GRVIIFYIND VMVHWMNNST
DATTPLGTAT RHGIVLNAPV GQQQYCRRFT MIG
|
|---|
| |