| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11920 |
|---|
| Symbol | |
|---|
| ID | 8386529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1233205 |
|---|
| End bp | 1233999 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644975281 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003133073 |
|---|
| Protein GI | 257055241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.207254 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAACCG CGATCACGGT GATCGTGCTC CTGTTGATCG TCGTCGCCGG CACGGCATAC
CTCGTGCGAT CCCAGGCACA GGCCAAAAGA CGCCAACTGG AAGACGCCAA GGCCGAGGCC
CGACGGTGGG TGGAGCGGCT CGGTGGCCAG GTGCTGAACC TCACCGGCAC CGACACGGCG
TCCCAACAGG CACTGGCCGA TGCGAGCGAA CGGTACAACG CCGCGGGCTC CGAGCTGGAA
CGCGCCCAGA CGGCCGAACA AGCACGCCTC GCCAAGGAAA CCGCGCTGGA AGGCCTCTAC
TACGTCCGCG CCGCACGCAC GGCCATGGGC CTCGACCCCG GCCCCGCACT TCCTGAGGAC
CCTGAGCGGG AGCGCGCGGG CAAGGTCACC GAGCACCGTG CGGTCACCGT CGAGGGGCAG
CACTACGAGG CCTCCCCTGA GCCCACCCCG AACACCCCGC ATTACTACCC GGGTGGACGG
GTCGCGGGCC GCCCCGTGCC CCAGGGGTGG TACAGCGAAC CGTGGTGGAA GCCCGCTCTC
GTCGCGGGCG CCTGGGGTTT CGGCTCCATG CTGCTGTTCT CCGCGATGTT CTCCGGAATG
GCCGGTATCC CGAGCGCCGC GGCCTGGGAG GCGGGCTACG ACGCAGGCCA GGAGGACGCG
CTGGAAAACG GCGGCGACGC CGGTGAAGGC GGGGACGCCG GCGGCGAGGA CGTCGGCGGA
GACGACTTCG ACGGTGACTT CGGAGGCGAC TTCGGCGGTG ACTTCGGAGG CGACTTCGGC
GACTTCGGCT TCTGA
|
|---|
| Protein sequence | MGTAITVIVL LLIVVAGTAY LVRSQAQAKR RQLEDAKAEA RRWVERLGGQ VLNLTGTDTA
SQQALADASE RYNAAGSELE RAQTAEQARL AKETALEGLY YVRAARTAMG LDPGPALPED
PERERAGKVT EHRAVTVEGQ HYEASPEPTP NTPHYYPGGR VAGRPVPQGW YSEPWWKPAL
VAGAWGFGSM LLFSAMFSGM AGIPSAAAWE AGYDAGQEDA LENGGDAGEG GDAGGEDVGG
DDFDGDFGGD FGGDFGGDFG DFGF
|
|---|
| |