Gene Svir_11670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11670 
SymbolpurU 
ID8386504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1201976 
End bp1202851 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content66% 
IMG OID644975257 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_003133050 
Protein GI257055218 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC AACACGACGG TTCTGACTAC GGGCGCCTGA TCGTGCAGGG CGAGGACCGG 
CCCGGAATCG TGGCGAGTGT CTCGCGGGTG CTCGGTGAGC ACGGCGCCAA CATCGTCTCG
CTCGACCAGG CGTCGAGCGA TGAGACGTCG GGCGGCCGGT TCTTCCAGCG CACCGTTTTC
CACCTGCCCG ACCTGTCGGG CAAGCTCGCC GACCTCAACC AGGCCCTGGA GAAGACGCTC
GTCGACGAGC TGGGCATGGA GTTCCGGTTG GTCGAGGCCA AGCGCAAGAA GCGTTTGGCG
ATCTTCGTCT CCAAGACCGA CCACTGCCTG CTCGACCTGC TGTGGCGGCA CCGGCGCGGA
GAGCTGCCGG TGACCATCTC CATGGTGGTG TCCAACCACC CCGACCTCGG CGACGAGGTG
CGTCGCTTCG ACATCCCGTT CTTCCACGTC CCCGTGGAAA AGGACCGCAA GGCCGAGGCC
GAGAAGGAAC AGCTCAACCT GCTGAAGGGC AATGTGGACC TGGTCGTCCT CGCCCGGTAC
ATGCAGATCC TCTCGGCCGA CTTCCTCGAC GAGGTCGGTG TGCCGGTCAT CAACATCCAC
CACTCGTTCC TGCCCGCGTT CATCGGGGCC GGCCCGTACC AGCGGGCGAA GGAACGCGGC
GTGAAGCTCG TGGGTGCCAC GGCGCACTAC GTCACCGAGG ACCTCGACGA GGGGCCCATC
ATCGAGCAGG ACGTGATCCG CGTGTCGCAC CGGGATTCGG TGCGTGACCT GCAGCGTAAG
GGTGCCGACG TCGAACGGCT CGTGCTGGCG CGCGCGGTGA AGTGGCACTG CGAGGACCGC
GTCATCCGGG ACGGCAACAC CACGGTCGTG TTCTAG
 
Protein sequence
MTRQHDGSDY GRLIVQGEDR PGIVASVSRV LGEHGANIVS LDQASSDETS GGRFFQRTVF 
HLPDLSGKLA DLNQALEKTL VDELGMEFRL VEAKRKKRLA IFVSKTDHCL LDLLWRHRRG
ELPVTISMVV SNHPDLGDEV RRFDIPFFHV PVEKDRKAEA EKEQLNLLKG NVDLVVLARY
MQILSADFLD EVGVPVINIH HSFLPAFIGA GPYQRAKERG VKLVGATAHY VTEDLDEGPI
IEQDVIRVSH RDSVRDLQRK GADVERLVLA RAVKWHCEDR VIRDGNTTVV F