| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_11560 |
|---|
| Symbol | |
|---|
| ID | 8386493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1188757 |
|---|
| End bp | 1189248 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644975246 |
|---|
| Product | cytosine/adenosine deaminase |
|---|
| Protein accession | YP_003133039 |
|---|
| Protein GI | 257055207 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.40278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAG AGCGAGAACT TCCCTACCTG CGGCGATGTG TCGAGCTGGC CTCCGAGGCC
CTCGAAGCGG GCGATGAACC GTTCGGCTCG GTACTGGTCG ACGCCGAGGG TGTCGTACGC
GCCGAGGATC GCAACCGGAT CGCGGGCGGC GACCGCACCC GGCATCCCGA GTTCGAACTC
GCCCGCTGGT CGACCACCGC TTTGACCCCC GAGGAGAGAC GAGGCGCCAC CGTCTACACC
TCGGGTGAGC ACTGCCCCAT GTGCGCCGCC GCCCACGGTT GGGTCGGACT CGGTCGCATC
GTCTACGTCG CCTCCTCCGC GCAGTTGTCG TCCTGGCTGG AGGAGTTGGG AGCCCCCGCG
CCTCCGGTGC GCCCGCTGCC GGCCGAGGAG ATCACGCCCG GTGTCGTGGT GGAGGGTCCG
GTGCCGTCCT TGGTCGATCA GGTGCGTGAG CTTCACGTCC GCTACCACCG CGGACGGTCC
GAGCAGGGAT AG
|
|---|
| Protein sequence | MIEERELPYL RRCVELASEA LEAGDEPFGS VLVDAEGVVR AEDRNRIAGG DRTRHPEFEL
ARWSTTALTP EERRGATVYT SGEHCPMCAA AHGWVGLGRI VYVASSAQLS SWLEELGAPA
PPVRPLPAEE ITPGVVVEGP VPSLVDQVRE LHVRYHRGRS EQG
|
|---|
| |