Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_11540 |
Symbol | |
ID | 8386491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1186850 |
End bp | 1187599 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644975244 |
Product | ABC-2 type transporter |
Protein accession | YP_003133037 |
Protein GI | 257055205 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.608741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTTTCTGGTC GGCGATCGCG TCGACGGAAC TACGGCTGCT GTTGCGGAAC ACGACGGTCG CGGTGTCGGC CCTGCTGATG CCGCCGGTGG TCGCGGGACT GTTCCTGCTC TCGGGCCTGC AGGACACCCC CTCGGCGGGA TGGGGTTTCC CCGCCGCGCT GATGCTGTTG ACGGTGTTCG GGATGTCCGG TTGCATCACG GCCGCCGGTA CGCTCACGTA CCGCCGTGAC GAGCTCTACC TGAAGCGACT TCGTTGTTCG CAGGCGTCCG ACGCGACGAT CCTCGCGGGC GTGGTCACCC CCGTGGCGGT GGTGACCGTC GGGCAGAGCC TGTTGATGGT GGTCATCATC GCCGTGGGGG CGTCGTCCGT GCCCGCGAAC CCCCTGCCGC TGCTGGCGGC GATCGTGTTC GGCACGGTGA TGAGCGTCGG TCTGGGTATG GCCACCACCG GGTTCGCGTC GTCGGGGGAG CAGGCCCAGA CCGTGGCCAC ACCGGTGTTC TTCGTGCTCA TCGGAACCGC CGTCTGGGCG GGGATGAACC TGGCGGACGG TCTCGACCTG ATGCACCAAC TGACCCCGGG GGGAGCCGTG GTGCAGTTGG TGTGGTGGTC GTACACCTCC GAGGCGTCCT TTCCCACGGC GCTGACCGAA GCGCTGCCCG CACTCGGGGG GATGGTCGGG TGGGCGGCCA TCGGCGCGGG CGCGGCCCGG CGGTACTTCC GTTGGGAGCC GCGGTCCTGA
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Protein sequence | MTLRFWSAIA STELRLLLRN TTVAVSALLM PPVVAGLFLL SGLQDTPSAG WGFPAALMLL TVFGMSGCIT AAGTLTYRRD ELYLKRLRCS QASDATILAG VVTPVAVVTV GQSLLMVVII AVGASSVPAN PLPLLAAIVF GTVMSVGLGM ATTGFASSGE QAQTVATPVF FVLIGTAVWA GMNLADGLDL MHQLTPGGAV VQLVWWSYTS EASFPTALTE ALPALGGMVG WAAIGAGAAR RYFRWEPRS
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