Gene Svir_11540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11540 
Symbol 
ID8386491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1186850 
End bp1187599 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID644975244 
ProductABC-2 type transporter 
Protein accessionYP_003133037 
Protein GI257055205 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.608741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC GTTTCTGGTC GGCGATCGCG TCGACGGAAC TACGGCTGCT GTTGCGGAAC 
ACGACGGTCG CGGTGTCGGC CCTGCTGATG CCGCCGGTGG TCGCGGGACT GTTCCTGCTC
TCGGGCCTGC AGGACACCCC CTCGGCGGGA TGGGGTTTCC CCGCCGCGCT GATGCTGTTG
ACGGTGTTCG GGATGTCCGG TTGCATCACG GCCGCCGGTA CGCTCACGTA CCGCCGTGAC
GAGCTCTACC TGAAGCGACT TCGTTGTTCG CAGGCGTCCG ACGCGACGAT CCTCGCGGGC
GTGGTCACCC CCGTGGCGGT GGTGACCGTC GGGCAGAGCC TGTTGATGGT GGTCATCATC
GCCGTGGGGG CGTCGTCCGT GCCCGCGAAC CCCCTGCCGC TGCTGGCGGC GATCGTGTTC
GGCACGGTGA TGAGCGTCGG TCTGGGTATG GCCACCACCG GGTTCGCGTC GTCGGGGGAG
CAGGCCCAGA CCGTGGCCAC ACCGGTGTTC TTCGTGCTCA TCGGAACCGC CGTCTGGGCG
GGGATGAACC TGGCGGACGG TCTCGACCTG ATGCACCAAC TGACCCCGGG GGGAGCCGTG
GTGCAGTTGG TGTGGTGGTC GTACACCTCC GAGGCGTCCT TTCCCACGGC GCTGACCGAA
GCGCTGCCCG CACTCGGGGG GATGGTCGGG TGGGCGGCCA TCGGCGCGGG CGCGGCCCGG
CGGTACTTCC GTTGGGAGCC GCGGTCCTGA
 
Protein sequence
MTLRFWSAIA STELRLLLRN TTVAVSALLM PPVVAGLFLL SGLQDTPSAG WGFPAALMLL 
TVFGMSGCIT AAGTLTYRRD ELYLKRLRCS QASDATILAG VVTPVAVVTV GQSLLMVVII
AVGASSVPAN PLPLLAAIVF GTVMSVGLGM ATTGFASSGE QAQTVATPVF FVLIGTAVWA
GMNLADGLDL MHQLTPGGAV VQLVWWSYTS EASFPTALTE ALPALGGMVG WAAIGAGAAR
RYFRWEPRS