Gene Svir_11420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_11420 
Symbol 
ID8386479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1176501 
End bp1177589 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID644975232 
Producthypothetical protein 
Protein accessionYP_003133025 
Protein GI257055193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC TGAGCACACC ACGAACCAAG ACAGCCGAGC CGGCCGGAAC GTCCGAGCCG 
GCCAAGACGC AGTCGCCCGA TTCGGCAGCG CAGACGGCCC CACTGCCACT GCCCCGGGGG
CCGCTGTCGG CGACCGTCGT GACCGCCTTA CGGGAAAGGC CCGACACGCG GCCCTACCTG
CCCACCGGTG CCGGACGGGC CGATCCGTAC GGCCACGACC TGCAGTTGAC CCTGCAGATC
TGCTACGAGC TGCACTATCA GGGGTTCACC GACGTCGATC CCGACTGGGA ATGGCATCCC
GATCTGCTGC GCCTACGCAC GGCTCTGGAA CAGCGGTTCC TGGCGGCCCT TCGCGCGGAC
GTCCCCGGTG GGGGCAGGGA CGCCGACGTC GAATCCGCAC TCGACGACCT CCTCGTCGAA
CCGGTACACG GTGAAGGGCT GACCCACTGG TTGCGGGACA AGGGCACGTG GCTGCAGATG
CGCGAATTCC TGGCGATGCG TTCGATCTAC CACCTGAAGG AGGCCGACCC GCACGTGTGG
GCCATCCCCC GGCTTCGCGG GCAGGCCAAA GCGGCGCTGG TGGCCGTGGA GTTCGACGAG
TTCGGCGGGG GCCGTTACGA GCGGATGCAC TCGCGTCTCT ACGCCGACCT GCTGGAGGCC
GCTGAACTGA GCTCCGATTA CCTGGGCTAC ATCGAACACG TACCGCCACA GGTGTTCGCC
ACCGTGAACC TGATGTCGAT GTTCGGCCTG CACCGGAATC TGCGGGGAGC GTTGGTGGGA
CACTTCGCCG CGGCCGAGAT CACCACGGCC CCCAGCGCCC ATCGCATGGT GCAGGCGCTC
GACCGGATGA ACGCACCGGA GGCGTGCCGG TTCTTCTACA CCGAACACGT GGAGGCCGAC
GCGGTGCACG AACAGGTGTT GCGGCGTGAG GTGATCGGCG ACCTGCTGAC CCGGGAACCC
CGCCTCGCCG CCGACGTCGT GTTCGGCATC CAGGCCACCG AACTGCTGGA GTCCCGACTC
GCCGAACACG CCCTGAAGCA CTGGCGCAAG GGCAGAAGCG CCCTACGCCG TCCTCTGAAC
GAGACGTAG
 
Protein sequence
MTTLSTPRTK TAEPAGTSEP AKTQSPDSAA QTAPLPLPRG PLSATVVTAL RERPDTRPYL 
PTGAGRADPY GHDLQLTLQI CYELHYQGFT DVDPDWEWHP DLLRLRTALE QRFLAALRAD
VPGGGRDADV ESALDDLLVE PVHGEGLTHW LRDKGTWLQM REFLAMRSIY HLKEADPHVW
AIPRLRGQAK AALVAVEFDE FGGGRYERMH SRLYADLLEA AELSSDYLGY IEHVPPQVFA
TVNLMSMFGL HRNLRGALVG HFAAAEITTA PSAHRMVQAL DRMNAPEACR FFYTEHVEAD
AVHEQVLRRE VIGDLLTREP RLAADVVFGI QATELLESRL AEHALKHWRK GRSALRRPLN
ET