Gene Svir_10780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_10780 
Symbol 
ID8386415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1111178 
End bp1111900 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content70% 
IMG OID644975168 
Productdethiobiotin synthase 
Protein accessionYP_003132961 
Protein GI257055129 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0132] Dethiobiotin synthetase 
TIGRFAM ID[TIGR00347] dethiobiotin synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGC TGGTGATATC CGGAACCGGG ACCGGCGTTG GCAAGACCGT GGTGACGGCG 
GCGGTGGCTG CGTTGGCGGC CGACCGCGGT CAACGTGTCG CCGTGTTCAA GCCCGCCCAG
ACCGGTGTCG CGCCGGACGA ACCGGGTGAT CTCGCCGAGG TACGTCGCCT CGCCGGTGAC
GTGACGACCT GCGAACTCCG CCGCTATCCG GACCCGTTGT CACCCGAGGC CGCCGCGCGT
CGCAGCGGTC TGCCGGAGGT GACGCCCGCC GACGCGGCGG CAGCGGCGAC TCGGCTGCAC
GACGATCACG ACCTCGTGCT CGTGGAGGGC GCGGGTGGTC TACTCGTCCG GTTCGACGCG
TCGGGAGGAA CGCTCGCCGA CGTGGCGTGG GCACTCAACG CCCCTGTGAT CGTCGTCGCG
GAGGCGGGAC TCGGCACGCT CAACGCCACG GCCCTGACCG CCGAGGTGGC GACCCGCAGG
GGACTCGACA TGCTCGGTGT CGTGATCGGA GCCTGGCCCG CTCATCCCGA CCTCGCCGCT
CGTTGCAATG CCACCGACTT GCCGAAAGCC GCCGCCGCAC CCCTGTTGGG GGTCTTGCCA
GCTGGATTGT CTTCGGTGAG CCGGGCACAA TTCCTCGACG AGGCACGTCG TGGGTTGTCC
CCGTGGTTGG GTGGTGTTTT CGACTCCGAC CGTTTCGCCC GCGCCGCGGC TTCGACGCCC
TGA
 
Protein sequence
MTVLVISGTG TGVGKTVVTA AVAALAADRG QRVAVFKPAQ TGVAPDEPGD LAEVRRLAGD 
VTTCELRRYP DPLSPEAAAR RSGLPEVTPA DAAAAATRLH DDHDLVLVEG AGGLLVRFDA
SGGTLADVAW ALNAPVIVVA EAGLGTLNAT ALTAEVATRR GLDMLGVVIG AWPAHPDLAA
RCNATDLPKA AAAPLLGVLP AGLSSVSRAQ FLDEARRGLS PWLGGVFDSD RFARAAASTP