Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_10440 |
Symbol | |
ID | 8386381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 1074699 |
End bp | 1075334 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644975134 |
Product | transcriptional regulator |
Protein accession | YP_003132927 |
Protein GI | 257055095 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0189255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0235057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTGG CGGTAACAAG GTCCAGGCGG GACGACTACA CGGAATCCAC CCGCGACGCG TTGATCGGCA GCGCCGTCGC CCTGTTCACC GAGCGCGGCT ATGCAGGGAC ATCGCTCGAC GAGATCGCGC GGCGGGCCCG GGTGACCAAA GGTGCGCTCT ACCACCACTT CAGCGGTAAA CAGGCCGTGT TCGAAGCCGC TTTCGACGCG GTGGAGACAG AGGTCAAAGG TCGACTGGAA AAAATCCTGC GCGGCGACGG AACGCCTTGG GAACGCGCGG TCGCCGGGTT ACGGGAGTTC ATCTCCAGCT GCCTCGATCC GGCTTACCAG CGGATCGCGT TGCACGAGGC CCCTGTCGTG ATGGGCTGGC AGCGTTGGCG CGCCGCCGAG GAACGCTACA GCTTCGGACT CATCAAAGCC GCCCTGCAGG ACCTCATCGA CGCGGGTGAC ATGATCAGCG TGCCGGTGGA CGTCGCCTCC CGGCTGCTGT TCGGCGCGCT GTCCAGCGCC GCCACGGAGA TCGCGGGCTC CGCCGAACCC GAACGGGTGG GAGCCGAGAT CGAACAAGTG GTGATCGCGT TGTTGCAGCA GGTGCGGGAC GCCTCACGTG GCGCACGTCC CGACCACCCT CGTTAA
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Protein sequence | MNVAVTRSRR DDYTESTRDA LIGSAVALFT ERGYAGTSLD EIARRARVTK GALYHHFSGK QAVFEAAFDA VETEVKGRLE KILRGDGTPW ERAVAGLREF ISSCLDPAYQ RIALHEAPVV MGWQRWRAAE ERYSFGLIKA ALQDLIDAGD MISVPVDVAS RLLFGALSSA ATEIAGSAEP ERVGAEIEQV VIALLQQVRD ASRGARPDHP R
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