| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10300 |
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| Symbol | |
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| ID | 8386367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1057243 |
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| End bp | 1058484 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644975120 |
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| Product | regulator of polyketide synthase expression |
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| Protein accession | YP_003132914 |
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| Protein GI | 257055082 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.10355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC AACCGTCGTC CACTCCGCCG GCTGTGGAAG CCGCGGCCTC GAGGCCGCGC
GCTCGACAGG AACTGTCCGA GTCGACGCTA CGTGCACTGG AACGCGCCTC CGGCCGACTC
GCCAAAGCGA GCGTGGCAGC CATCGAGGAG CAGCTGCCCT GGTTCCGGAG AATGCCCGCT
GACCAGCGGG CGAGCGTGCT GTTGATCACC CAGGCCGGGG CGGCGGGCTT CGTGCGTTGG
ATGCGGGACT CGCAGGAAGC GTTGAAGCTC ACCGCCGAAG CGTTCCGGTC GGCGCCACGG
GAGCTGTCCC GTTGGATCAG CCTGCGCCAG ACCGTCGAGA TCGTGCGGTT GGCGGTGGAC
GTGTTCGAGG AGCAGCTACC TCAGTTCGCC GCCGACGACG AGGAACGCGC CATCCTGACG
GAGGGCATCC TGCGGTACGG CCGGGAGATC GCCTTCGCCG CCGCCACCTC GTACGCGGCC
GCCGCCGAGG CACGAGGCGC GTGGGATGCC CGCCTGGAGG CGCTGGTCGT GGACGGCATC
GTGCGTGGTG ACGCCGAGGA GTCGGTGCTG TCCCGGGCCG CCGCGCTGGG TTGGGACCCC
GCCGCCGACG CCACCGTGCT CGTGGGCAAC CCCCCTTCCG ACGATCCGCC GTCGGTGGTG
TTCGAGGTGC GCAGCAAGGC GGCGCGTGTC GGCCGACCGG TCCTACTCGG CGTGCAGGGC
TCCCGACTGG TGGTCGTGGT CGCGGGTCCG ACCGAGGGCA CGGCGAAGGA CGAGGAGATC
CTGCCCGTCC TGTCGACAGC GTTCGCCGAG GGGCCTGTCG TCGCGGGTCC CACGGTGAGC
AGTCTCGCCG AGGCGCATCG CAGTGCGGCC GAGGCGCTGT CCGGCTTGCG GGCCGTGGTC
GGCTGGCCCG CGGCGCCACG TCCCACACGT TCGATCGATC TCCTACCGGA ACGCGCCCTG
GCGGGAGACG CCGAGGCCGA ACGCGTACTC GTGGAGCAGA TCGCTCGCCC GTTGGAAGAG
GCCGGTCCGG CCCTGCTCGA GACCATCGAG ACCTATTTGG AAAGCGGCGG GGTGTTGGAG
ACATGCGCAC GACAATTGTT CGTCCATCCC AACACCGTGC GGTATCGCCT GAAGAAGGCC
ACCGAGCTCA CCGGACGTAA CGCCGCCGAT CCCCGCGACG CGCTCGTACT GCGAACGGCG
CTGACCGTGG GCCGATTGGC CCGTTCTCGT GGCCTGTGGT GA
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| Protein sequence | MSTQPSSTPP AVEAAASRPR ARQELSESTL RALERASGRL AKASVAAIEE QLPWFRRMPA
DQRASVLLIT QAGAAGFVRW MRDSQEALKL TAEAFRSAPR ELSRWISLRQ TVEIVRLAVD
VFEEQLPQFA ADDEERAILT EGILRYGREI AFAAATSYAA AAEARGAWDA RLEALVVDGI
VRGDAEESVL SRAAALGWDP AADATVLVGN PPSDDPPSVV FEVRSKAARV GRPVLLGVQG
SRLVVVVAGP TEGTAKDEEI LPVLSTAFAE GPVVAGPTVS SLAEAHRSAA EALSGLRAVV
GWPAAPRPTR SIDLLPERAL AGDAEAERVL VEQIARPLEE AGPALLETIE TYLESGGVLE
TCARQLFVHP NTVRYRLKKA TELTGRNAAD PRDALVLRTA LTVGRLARSR GLW
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