| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10160 |
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| Symbol | |
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| ID | 8386353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 1044328 |
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| End bp | 1046088 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644975106 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003132900 |
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| Protein GI | 257055068 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.290276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.561115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCACCA GGATGTCGTC GCTGTTCCTG CGCACCCTGC GTGAGGACCC GGCCGACGCC
GAGGTGCCCA GCCACAAACT GTTGGTCCGG GCCGGATACG TGCGGCGGGT CGCCCCGGGC
GGGTACTCCT GGCTGCCACT GGGCCTGCGG GTGTTGCGGA ACGTCGAGGC GATCGTGCGC
GAGGAGATGG ACGCCATCGG CGCGCAGGAG ATCCAGTTCC CCGCGCTGTT GCCGAAGGAG
CCGTACGAGA CCACGGGACG TTGGACCGAG TACGGCCCGA GCCTGTTCCG CCTCGTCGAC
CGCAAGGGAG CCGACTACCT GCTCGGCCCG ACGCACGAGG AGCTGTTCGC GCTCACGGTG
AAGGGCGAGT ACTCCTCGTA CAAGGACTAT CCGGTCATCC TGTACCAGAT CCAGACGAAG
TACCGGGACG AAGCGCGGCC GAGGGCCGGA ATCCTGCGGG GTCGGGAATT CATCATGAAG
GACTCGTACT CCTTCGACCT CGACGACGAG GGGCTCGCGC GGTCCTACGA GCTGCACCGC
AACGCCTACC TGCGGATCTT CGACCGGCTG GGACTCGACT ACGTGGTGGT CGCCGCGACC
TCCGGCGCGA TGGGCGGTTC GGCGTCGGAG GAGTTCCTGG CCGTGGCCGA GACGGGTGAG
GACACATACG TCCGCAGCAC CGAGTCCGAG TACGCGGCCA ATGTCGAGGC CGTGGTGACG
CCCGCTCCGC CGGAGCAGTC GGTGGAGGAC AAACCCGCGG CGCAGGTGCA CTACACCCCC
AACACGCCCA CCATCGAAAC GCTGGTGGAC TTCCTCAACG CCGCCGATCT GGGGCGTACG
TTCACCGCCG CCGACACGTT GAAGAACGTC CTCGTCAAGA CCCGCATGCC GGGCGAGGAG
GACTGGAAGC TGCTCGGTAT CGGTGTGCCC GGTGACCGCG AGGTCGACAT GAAGCGGCTG
GAGGCCTCGC TGGCGCCCGC CGAGGTGGCG TTGTTGGAGG ACTCCGACTT CGCCGCCAAC
CCGTTCCTCG TCAAGGGCTA CATCGGCCCC GGGGCGTTGC AGGCCAACGG CGTGCGGTAC
CTGGTGGACC CGCGTGTCGT CCGTGGTACG GCGTGGGTGA CCGGCGCGGA CAAACCCGAC
CACCACGTCG TGGACCTGGT GTGCGGGCGT GACTTCACGC CGGACGGCAC CGTGGAGGCC
GCCGAGGTGC GTGAGGGTGA CCCGTCCCCG GACGGTCGGG GCACCCTCGT CACGGCACGC
GGTATCGAGA TCGGCCACAT CTTCCAGCTC GGCCGCAAGT ACACCGATGC CTTCGAGGTC
GACGCGCTCG GTCCCGACTC CAAACCCATC CGCATCACCA TGGGTTCGTA CGGCATCGGG
GTGTCGCGTG TGGTCGCGGC CATCGCGGAG CAGCACCACG ACGAGCTGGG CTTGGTGTGG
CCCCGTTCCG TGGCGCCCGC CGACGTGCAC GTGGTGATCG CGGGCAAGGA CGACGCCGTC
ACCGAGGGCG GGGAGCGGTT GGCCGCCCAG CTGGCCGAAC GCGGGGTTCG GGTCCTGCTG
GACGATCGCA AGGCCACACC CGGGGTGAAG TTCGCCGACG CCGAACTCAT CGGTGTGCCC
ACGATCGTGG TCGTCGGTCG TGGACTGGCC AAGGGCGTGG TCGAGGTCAA GGACCGCGCG
ACGGGCGAGC GCACCGAGGT CGCCGTGGAT TCGGCCGTGG GGCATCTTGT GGATCTGGTC
TCCGGGGATG CCACCAAGTA G
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| Protein sequence | MITRMSSLFL RTLREDPADA EVPSHKLLVR AGYVRRVAPG GYSWLPLGLR VLRNVEAIVR
EEMDAIGAQE IQFPALLPKE PYETTGRWTE YGPSLFRLVD RKGADYLLGP THEELFALTV
KGEYSSYKDY PVILYQIQTK YRDEARPRAG ILRGREFIMK DSYSFDLDDE GLARSYELHR
NAYLRIFDRL GLDYVVVAAT SGAMGGSASE EFLAVAETGE DTYVRSTESE YAANVEAVVT
PAPPEQSVED KPAAQVHYTP NTPTIETLVD FLNAADLGRT FTAADTLKNV LVKTRMPGEE
DWKLLGIGVP GDREVDMKRL EASLAPAEVA LLEDSDFAAN PFLVKGYIGP GALQANGVRY
LVDPRVVRGT AWVTGADKPD HHVVDLVCGR DFTPDGTVEA AEVREGDPSP DGRGTLVTAR
GIEIGHIFQL GRKYTDAFEV DALGPDSKPI RITMGSYGIG VSRVVAAIAE QHHDELGLVW
PRSVAPADVH VVIAGKDDAV TEGGERLAAQ LAERGVRVLL DDRKATPGVK FADAELIGVP
TIVVVGRGLA KGVVEVKDRA TGERTEVAVD SAVGHLVDLV SGDATK
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