| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10130 |
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| Symbol | |
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| ID | 8386350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1040624 |
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| End bp | 1041973 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644975103 |
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| Product | DNA/RNA helicase, superfamily II |
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| Protein accession | YP_003132897 |
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| Protein GI | 257055065 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.526574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGAGA TTTCCACGAC GATTTCCACG ACGGTTTCCA CAACCCCCGC GACGTCGATC
ACGTTCGCCG ACCTCAACCT GCCCAAGGCT CTCCACCGGG CGTTGCGCAA GGCCGGGCTG
CACACCCCGT TCCCCATCCA GGCGGCCACG CTGCCCGACG CGCTCGCCGG TCGCGACGTC
CTCGGCCGGG CCCAGACCGG TTCGGGCAAG ACCCTGGCGT TCGGTCTGGC ACTGCTGTCC
CGTCTCGACG GGGGGAAGGC CCGGCCACGA CGACCGCGGG CCCTGGTGCT CGTGCCCACG
CGGGAACTGG CCATGCAGGT GGCCGACGCG CTCGTACCCC TGGCGAAGGC GATGGGTCTG
TGGTGCCGCA CCGTCGTCGG TGGCATGTCC CTCCAGCGCC AGGCCGAGGC GCTGCTGCGA
GGCGTGGACC TGGTGATCGC CACTCCGGGA CGGCTGTCGG ACCACGTCCG CCAGGGCACG
TGCACGCTCG ACGGCATCGA ACTGGTGGCC ATCGACGAAG CCGATCAGAT GGCCGACATG
GGATTCCTGC CCCAGGTGCG CCAGATCCTG GACCGCACTC CCCCGGACGG ACAGCGGCTG
TTGTTCTCGG CCACGTTGGA CGATGCCGTG GCGGATCTCG TCAGCCGCTA CCTGACCGAC
CCGGTGACCC ATTCCGTCGC TCCCGTGACG GCGAGCGTCG ACACCATGGA GCATCACCTG
TTCCAGGTGG AGCACAAGGA CAAGCAGGCC GTGGTGACCG AGATCGCCGC GCGGCAGGGA
CGCACGATCC TGTTCGTCCG CACGAAACAC CACGTCGACC GACTCACCAC GCGGTTGCGG
GCCGCCGGTG TGCCCGCGGC GGCTCTGCAC GGCGGCAAGA CCCAGGGTCA ACGTAACCGG
GTGCTCGCCG ACTTCCGCAG CGGCCGGATG CCGGTGTTGG TGGCCACGGA CGTCGCGGCC
CGCGGCATCC ACGTCGACGG CATCGGTCTC GTACTGCACG TCGATCCCGC CGCGGATCAC
AAGGACTACC TGCACCGTGC GGGCCGCACC GCTCGCGCGG GCGCGTCGGG GACGGTCGTC
ACCCTGGTGA CACGAGAACA GCGCCGAACG GTGCGTCGGA TGTTGGAGCG TGCCGGTGTG
CGCCCGCACT ACGCGGTGGT GTCACCGGGC GATGCGGAAC TGATCCGGAT CACGGGGGCA
CGCACCCCCA GCGGCGTGCC CGTCGTCGAC CGGACCTCGA CACGCCGGCA GGCACGACCG
TCGCAGCAGC GACGGCGCAC CGGACCGGCT CGAGACCGCA GCCCCCTACG CGGCTCCGGC
AGCCGTCGAA GCGCCGCTGC GGTGCGCTAG
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| Protein sequence | MTEISTTIST TVSTTPATSI TFADLNLPKA LHRALRKAGL HTPFPIQAAT LPDALAGRDV
LGRAQTGSGK TLAFGLALLS RLDGGKARPR RPRALVLVPT RELAMQVADA LVPLAKAMGL
WCRTVVGGMS LQRQAEALLR GVDLVIATPG RLSDHVRQGT CTLDGIELVA IDEADQMADM
GFLPQVRQIL DRTPPDGQRL LFSATLDDAV ADLVSRYLTD PVTHSVAPVT ASVDTMEHHL
FQVEHKDKQA VVTEIAARQG RTILFVRTKH HVDRLTTRLR AAGVPAAALH GGKTQGQRNR
VLADFRSGRM PVLVATDVAA RGIHVDGIGL VLHVDPAADH KDYLHRAGRT ARAGASGTVV
TLVTREQRRT VRRMLERAGV RPHYAVVSPG DAELIRITGA RTPSGVPVVD RTSTRRQARP
SQQRRRTGPA RDRSPLRGSG SRRSAAAVR
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