| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_10080 |
|---|
| Symbol | |
|---|
| ID | 8386345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 1035510 |
|---|
| End bp | 1036910 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644975098 |
|---|
| Product | mycothione reductase |
|---|
| Protein accession | YP_003132892 |
|---|
| Protein GI | 257055060 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR03452] mycothione reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0975361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCACT ACGACCTCGT GATCGTCGGG ACCGGATCAG GCAACTCGAT CCTGGACCCC
CGTTTCGCCG ACCGGAAGGT CGCCATCGTC GAGAAGGGAG TGTTCGGCGG AACGTGCCTC
AACGTGGGAT GCATCCCCAC GAAGATGTTC GTGCACCCCG CCGACCTGGC CGCCACCCCC
GAGTCCGCGG CGAAGCTCGG CGTCGACCTG GAGCTGCGGA ACGTACGCTG GCGAAAGATC
CGCGACCGCG TGTTCGGTCG GATCGACCCC ATCGCCGAGG GCGGTCGGCG CTACCGCATC
GAGCACGAGG ACAACGCGAA CGTCACGGTG TACGAGGGTG AAGCACGCTT CATCGACCAC
AAGAAACTCG CGGTGCAACT GGCCGACGAG GAGGCGATCC TCACCGCCGA CAACTTCGTG
CTGGCCGCCG GTGGCCGGGC CGTCGTGCCC GACATCCCCG GGCTGGCCGA CGTCGACTAC
CACACCTCCG ACACCGTGAT GCGCATCGAC GAGCTGCCGC GTCGGGCGAT CATCCTCGGC
AGCGGGTTCA TCAGCGCCGA GTTCGCCCAC GTGTTCGCGT CGTTCGGCGT GGACGTGACG
GTCATCGCGA GGTCGGGTGC GCTGCTGCGC AATGAGGACG ACGACATCAG CAGGCGGTTC
ACGGAATTGG CCTCGCAGCG CTACGACGTA CGACTGAACC GCCGTACGGT CCGGGTACAC
CGCGCTGGCA GAGGCGGTAC CGGCGTGGTG CTGGAACTGG AGGGCCCCGG CGGTGAGGAG
ACCGTCGAAG GGGACCTGTT GCTCATCGCG ACGGGACGAC AGCCGAACTC AGACCTGCTC
AACGTGGCCG CCACCGGCAT CTCCACCAGG CCGAGCGGAC ACGTCGTCGT CGACGAATAC
CAACGCACCG AGGTGGACGG CATCTACGCC CTGGGCGATC TGTCCTCGCC GTACGAGCTG
AAACACGTGG CCAACCACGA GGCCCGCGTG GTGCAGCACA ACTTGCTGCA TCCCGACGCC
CCGATCGCCG CCGATCACCG GTTCGTGCCG CACGCGGTGT TCACCTCGCC GCAGATCGCC
TCGGTGGGCC TCACCGAACG CGACGCAGCG GCGCGCGGTG TGCCGTACGT GACGGCCACC
CAGAACTACG CGGACATCGC CTACGGCTGG GCGATGGAGG ACACCACCGG GTTCGCGAAA
CTGCTCGCCG ACCCCCGTTC GGGACAACTG CTGGGCGCGC ACATCATCGG CGCACAGGCC
CCGACGCTGT TGCAGCCGTT GATCCAGGCG ATGAGCTTCG GCCTCGACGC GCGCTCGATG
GCTCGGGGGC AGTACTGGAT CCACCCGGCG CTACCGGAGC TGGTCGAGAA CGCGTTGCTG
GCGCTGCCGC TGAAGGACTG A
|
|---|
| Protein sequence | MPHYDLVIVG TGSGNSILDP RFADRKVAIV EKGVFGGTCL NVGCIPTKMF VHPADLAATP
ESAAKLGVDL ELRNVRWRKI RDRVFGRIDP IAEGGRRYRI EHEDNANVTV YEGEARFIDH
KKLAVQLADE EAILTADNFV LAAGGRAVVP DIPGLADVDY HTSDTVMRID ELPRRAIILG
SGFISAEFAH VFASFGVDVT VIARSGALLR NEDDDISRRF TELASQRYDV RLNRRTVRVH
RAGRGGTGVV LELEGPGGEE TVEGDLLLIA TGRQPNSDLL NVAATGISTR PSGHVVVDEY
QRTEVDGIYA LGDLSSPYEL KHVANHEARV VQHNLLHPDA PIAADHRFVP HAVFTSPQIA
SVGLTERDAA ARGVPYVTAT QNYADIAYGW AMEDTTGFAK LLADPRSGQL LGAHIIGAQA
PTLLQPLIQA MSFGLDARSM ARGQYWIHPA LPELVENALL ALPLKD
|
|---|
| |