Gene Svir_09790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09790 
Symbol 
ID8386316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp1006946 
End bp1007305 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content66% 
IMG OID644975069 
ProductLSU ribosomal protein L19P 
Protein accessionYP_003132863 
Protein GI257055031 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.54883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGC TGGACGCGTT GGACGCCGAG TCGCTGCGTT CTGACATCCC CTACTTTCGC 
CCGGGCGACA CGCTGAAGGT CCACGTCCGC GTCATCGAGG GCAACCGCGA GCGCAACCAG
GTGTTCGAAG GCGTGGTCAT CCGCCGCCAG GGCGGTGGTG TCCGCGAGAC CTTCACCGTG
CGCAAGGTCT CCTTCGGTGT CGGCGTGGAG CGTACGTTCC CGGTGCACTC GCCGAACATC
GCCAAGATCG AGGTTGTCAA GCGCGGTGAC GTGCGTCGTG CGAAGCTGTA CTACCTCCGC
GACCTGCACG GCAAGGCCGC CAAGATCAGG GAGCGTCGCG AGACGCCCTC TGCGTCCTGA
 
Protein sequence
MNTLDALDAE SLRSDIPYFR PGDTLKVHVR VIEGNRERNQ VFEGVVIRRQ GGGVRETFTV 
RKVSFGVGVE RTFPVHSPNI AKIEVVKRGD VRRAKLYYLR DLHGKAAKIR ERRETPSAS