Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09540 |
Symbol | |
ID | 8386291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 979251 |
End bp | 980534 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644975044 |
Product | transcriptional regulator/sugar kinase |
Protein accession | YP_003132838 |
Protein GI | 257055006 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.208854 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGAGC CCAGTACGGA ACTACTGGAA AGCTATGCAC GCCTGCTCGA TCTTGTACGC AGCGGTGTCG CCGATACCCG TCCCGCTCTG AGCCAACGCA CCGGCCTCGG CAGAACGGCC ATCACCCAAC GCACCACCAC GCTTCTCGAC GCGGGACTGT TGGAGGAGGG AGACCTCAAC CCCTCCACGG GAGGTCGGCA GGCCAGAACT CTGCGCTTCT GCAAGGACGC CGGTCGCATC CTCACCGCGG AACTCGGCGC CACCGGTTTC ACGGCGGGGA TCACCGACCT CATGGGCACG GTGCTCACCA AGCGGCATCG AGACTGCGAC ATCGCCCAAG GCCCGGATCC CGTCCTCTCC GAAGTCGAGT CCACACTCGA CGAGCTGCTG CGGGAGATCG ACGGCGCGCC GTCGGATGTG TGGGGCGTCG GCCTCGGGCT TCCGGGACCG GTGGAATTCG CCACCGCCCG ACCGTCCGAG CCACCGATCA TGCCCGGCTG GAACAACTAT CCGGTGCGGG AACGGCTCGT CGCGCGGTAC AACGCGCCGG TGTGGGTGGA CAACGAGGTC AACCTGCTGT GCCTCGGCGA ACTCCGCGCA CCCGGCATGT CGGACGACCT GGGTGACCTG CTCTACGTCA AGATCGGCAC CGGCATCGGC GCGGGAATAA GCCACGCCGG ACACCTACAC CGCGGCGCCC AGGGCTGCGC CGGTGACATC GGCCACGCCG CCGTCACCGA CGACAACACC GTCGTCTGTC GCTGCGGCAA GACCGGCTGC CTCGAAGCCG TCGCGGGAGG AGCCGCGCTC GCCAGGGACG GCGAACAGCT GGCCCGTTCC GGAAAGAGCC CCGTGCTCGC CGCCATCCTC AACACCAAGG GGACCATCAC TGCCGCCGAC GTCACCACGG CCGCGGGCGC GGGTGACCAT CACGCCGTGC AGTTGCTCGT GGCCGCGGGC CGACGCATCG GCGCCATGCT CGCCACGATG GTGAACTTCT ACAATCCGTC CACCATCCTC CTCGGCGGCA AGATCGCGGA AGCGGGTGAT CTGTTCCTCG CCATCATCCG CGAAACCATC TACCGCCGTT CCCTCCCGCT GTCCACCCGC GAGCTCCGCA TCGAGAAGGC CCGGCTCGGT GAGGAGGGCG GGCTCGTCGG CGCCGCCTAC ATGGTGCTCG ACGAGCTGTT CTCCGTACGG CACTTCGGTA AATGGCTCCC GGCCGGTTCC CCGAGCGGTA TCGCCGACCT ACACGGGACG AACGGCGTCG CCCAACGGGC TTGA
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Protein sequence | MDEPSTELLE SYARLLDLVR SGVADTRPAL SQRTGLGRTA ITQRTTTLLD AGLLEEGDLN PSTGGRQART LRFCKDAGRI LTAELGATGF TAGITDLMGT VLTKRHRDCD IAQGPDPVLS EVESTLDELL REIDGAPSDV WGVGLGLPGP VEFATARPSE PPIMPGWNNY PVRERLVARY NAPVWVDNEV NLLCLGELRA PGMSDDLGDL LYVKIGTGIG AGISHAGHLH RGAQGCAGDI GHAAVTDDNT VVCRCGKTGC LEAVAGGAAL ARDGEQLARS GKSPVLAAIL NTKGTITAAD VTTAAGAGDH HAVQLLVAAG RRIGAMLATM VNFYNPSTIL LGGKIAEAGD LFLAIIRETI YRRSLPLSTR ELRIEKARLG EEGGLVGAAY MVLDELFSVR HFGKWLPAGS PSGIADLHGT NGVAQRA
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