Gene Svir_09210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09210 
Symbol 
ID8386258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand+ 
Start bp944665 
End bp945342 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID644975012 
ProductUracil-DNA glycosylase 
Protein accessionYP_003132806 
Protein GI257054974 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.031789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.516797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAC GACCACTGCA CGAGATCCTG GATCCGGGCT GGGCCAAAGC GCTGGAACCG 
GTCGCCGACG AAATCGCCGC CATGGGCCAG TTCCTGCGCG CCGAGATCGC GGCGGGGCGC 
ACGTACCTGC CCGCCGGCGA CAAGATCCTC CGCGCGTTCC AACAGCCGTT CGACGACGTA 
CGCGTGCTGA TCGTCGGACA GGACCCCTAT CCCACACCGG GTCACCCGAT CGGGTTGTCC 
TTCGCGGTCG CGCCGGATGT GCGTCCGCTC CCCAAGAGTC TCGTCAACAT CTTCCGCGAG 
TACTGCGACG ACCTCGGGTA TCCGGAGCCG TCCAACGGCG ATCTCACCCC GTGGGCCGAA 
CAAGGGGTAC TGCTGCTCAA CAGGGCGCTC ACGGTGCAGC CCGGCAAACC GAACTCCCAC 
CAGGGCAAGG GTTGGGAGGA GATCACCGAG CGGGCCATCG TGGCGCTGGT GGAACGGAAC 
AAACCGTTGG TGGCGATCCT GTGGGGGAGC AACGCGCGCA AGCTCAAGCC ACTGCTCGGC 
TCGGTCCCGT GTGTTGAATC GGTGCACCCG AGCCCGCTTT CAGCACGGAA CGGTTTCTTC 
GGTTCCCGGC CGTTCAGCCG CACCAACGCG TTGCTCCGAC AGCAAGGCGC CGAGCCGATC 
GACTGGAAAC TGCCGTGA
 
Protein sequence
MTARPLHEIL DPGWAKALEP VADEIAAMGQ FLRAEIAAGR TYLPAGDKIL RAFQQPFDDV 
RVLIVGQDPY PTPGHPIGLS FAVAPDVRPL PKSLVNIFRE YCDDLGYPEP SNGDLTPWAE 
QGVLLLNRAL TVQPGKPNSH QGKGWEEITE RAIVALVERN KPLVAILWGS NARKLKPLLG 
SVPCVESVHP SPLSARNGFF GSRPFSRTNA LLRQQGAEPI DWKLP