Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_09110 |
Symbol | |
ID | 8386248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 936066 |
End bp | 936863 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644975002 |
Product | hypothetical protein |
Protein accession | YP_003132796 |
Protein GI | 257054964 |
COG category | [S] Function unknown |
COG ID | [COG1920] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.14511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTCG ACCTGATCGT GCCGCTCAAG GAACCGAGCA GGGGCAAGTC CCGGCTGAGG GACGGCCTGG GCTGTCCGGT GAGTGACCAC CGGCACGCCG AACTCGTGCT CGCGTTCGCG TTCGACACAC TGCGCGCAGC CACCGCGACA CCGGGTGTAC GCCGGGTGTT GGTCGTCAGC TCCGTCCCCG CGGCACTGAC GGCGTTGCGG GAGCTGGGGG TCGACGTCGT CGGCGAACAT GCCGACGACA CCGGCGACAT CGGTAACGAC AGTGACAGCG ACGACGACGG CGACGACAGC GACGGCAGCG ACAGCGACGA TGGAGCCCCG TCCGGACGCA ACGGGGCGGG GAATGGCGCG GCGGGGCCGG TGGGCACGAC CGACGGCGCG GACGCCGCGA ACACCGGCCT GAACGCGGCT CTGCGCACCG GGGAACGGGT GTTGCGAGCC ACGGACCCGG GATGCGTCAT CGGCGCTCTC CAGGCGGATC TGCCCGCATT ACGCCCTGAC GAACTCGCCG CCGCCCTCGC CGCCGCCGAC GGGCGTAGGG CGTTCACCGC CGATCGACAC GGCAGCGGCA CCACGCTGTT GCTGTCCGCA CCGGGACAAC GCCTCGATCC CCACTTCGGC CCGGGGTCGG CTCGGGCACA CGCGCTTTCG GGTGCGTTGC CGTTGTCGGC GCCGCTGCCC TCACTACGCA CCGACGTGGA CACTCCGGGT GACCTGGAAC ACGCTCGCCT GCTGGGGCTG GGAGAGCGCA CCCGAACCGT TCTCGACCGG GTCTGTCTAC CGTCCTGA
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Protein sequence | MAVDLIVPLK EPSRGKSRLR DGLGCPVSDH RHAELVLAFA FDTLRAATAT PGVRRVLVVS SVPAALTALR ELGVDVVGEH ADDTGDIGND SDSDDDGDDS DGSDSDDGAP SGRNGAGNGA AGPVGTTDGA DAANTGLNAA LRTGERVLRA TDPGCVIGAL QADLPALRPD ELAAALAAAD GRRAFTADRH GSGTTLLLSA PGQRLDPHFG PGSARAHALS GALPLSAPLP SLRTDVDTPG DLEHARLLGL GERTRTVLDR VCLPS
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