Gene Svir_09110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_09110 
Symbol 
ID8386248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp936066 
End bp936863 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content71% 
IMG OID644975002 
Producthypothetical protein 
Protein accessionYP_003132796 
Protein GI257054964 
COG category[S] Function unknown 
COG ID[COG1920] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03552] 2-phospho-L-lactate guanylyltransferase CofC 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.14511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG ACCTGATCGT GCCGCTCAAG GAACCGAGCA GGGGCAAGTC CCGGCTGAGG 
GACGGCCTGG GCTGTCCGGT GAGTGACCAC CGGCACGCCG AACTCGTGCT CGCGTTCGCG
TTCGACACAC TGCGCGCAGC CACCGCGACA CCGGGTGTAC GCCGGGTGTT GGTCGTCAGC
TCCGTCCCCG CGGCACTGAC GGCGTTGCGG GAGCTGGGGG TCGACGTCGT CGGCGAACAT
GCCGACGACA CCGGCGACAT CGGTAACGAC AGTGACAGCG ACGACGACGG CGACGACAGC
GACGGCAGCG ACAGCGACGA TGGAGCCCCG TCCGGACGCA ACGGGGCGGG GAATGGCGCG
GCGGGGCCGG TGGGCACGAC CGACGGCGCG GACGCCGCGA ACACCGGCCT GAACGCGGCT
CTGCGCACCG GGGAACGGGT GTTGCGAGCC ACGGACCCGG GATGCGTCAT CGGCGCTCTC
CAGGCGGATC TGCCCGCATT ACGCCCTGAC GAACTCGCCG CCGCCCTCGC CGCCGCCGAC
GGGCGTAGGG CGTTCACCGC CGATCGACAC GGCAGCGGCA CCACGCTGTT GCTGTCCGCA
CCGGGACAAC GCCTCGATCC CCACTTCGGC CCGGGGTCGG CTCGGGCACA CGCGCTTTCG
GGTGCGTTGC CGTTGTCGGC GCCGCTGCCC TCACTACGCA CCGACGTGGA CACTCCGGGT
GACCTGGAAC ACGCTCGCCT GCTGGGGCTG GGAGAGCGCA CCCGAACCGT TCTCGACCGG
GTCTGTCTAC CGTCCTGA
 
Protein sequence
MAVDLIVPLK EPSRGKSRLR DGLGCPVSDH RHAELVLAFA FDTLRAATAT PGVRRVLVVS 
SVPAALTALR ELGVDVVGEH ADDTGDIGND SDSDDDGDDS DGSDSDDGAP SGRNGAGNGA
AGPVGTTDGA DAANTGLNAA LRTGERVLRA TDPGCVIGAL QADLPALRPD ELAAALAAAD
GRRAFTADRH GSGTTLLLSA PGQRLDPHFG PGSARAHALS GALPLSAPLP SLRTDVDTPG
DLEHARLLGL GERTRTVLDR VCLPS