| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08600 |
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| Symbol | |
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| ID | 8386197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 880534 |
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| End bp | 881535 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644974951 |
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| Product | methylthioribose-1-phosphate isomerase |
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| Protein accession | YP_003132747 |
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| Protein GI | 257054915 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
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| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.688964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAGAA CGATCGACTG GGACGGCGAC GCGGTGGTGA TCATCGACCA GACCGCGCTG
CCGGAGACCT TCCGCACGCT GCGGTTGGAG ACGGTGGACG AGCTCATCGA GGCGATCCGC
CGGTTGGCCG TGCGAGGTGC TCCCGCGCTC GGCGCCGCCG GAGCGCTGGG CGTGGCGCTG
TCCGCCCGGC GACACGGCAC GGATTCGGAA TCGGCACTGG CCGCCGTTCG CGCCGAGGCC
GAGCGACTCG CCCATGCCCG TCCCACGGCG GTGAACCTGC GCTACGGCGT GGAGCGAGCG
CTGGCCGCCC TCCCGCAAGG GGCCGACGCG GTGCTCACCG ACGCGCTGGC CGTACTCGAC
GAGGACGAAC GCGTCAACCG CGCCGCTTCC CGGCACGCCG CCGAGCTTTT GCTGCGGCGG
TGTCCCCCAC GTCCGCTGCG CGTGCTGACC CACTGCAACA CCGGGCGCCT GGCCACGGTC
GCGTGGGGCA CGGCCCTGGG CACCGTCCGG CACCTGCACG CCGACGGTCG GATCGACCAG
GTGCTGGTCG ACGAGACCCG ACCACTGCTG CAGGGTTCGC GGCTCACCGC GTGGGAGCTC
GCCGACGAGG GCATCCCCCA CCGGGTGCTG CCCGACGGCG CAGCGGCGGC GGCGATGGCA
CGTGGCATGG TGGACTGCGT GGTGGTCGGC GCCGACCGAG TGGCCGCGAA CGGGGACACC
GCCAACAAGA TCGGCACCTA TGGCCTGGCC GTGGCCGCCG CTCACCACGA CATCCCCTTC
GTCGTCGTCG CCACGGAATC CACTCTGGAC CGTTCACTGC CGGACGGCGG GGGCATCGTC
ATCGAGGAAC GCGCGGCCGA GGAGGTCACG CAGCTGGCCG GTGTGCCCGT CGCGCCGGAG
GGCTCGGCCG TGTTCAACCC CGCCTTCGAC GTCACACCGG TGGCACTGTT GACGGCCGTG
GTGACCGAGA ACGGTGTCTT CGCCACCGGC CGTGGTACGT AA
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| Protein sequence | MARTIDWDGD AVVIIDQTAL PETFRTLRLE TVDELIEAIR RLAVRGAPAL GAAGALGVAL
SARRHGTDSE SALAAVRAEA ERLAHARPTA VNLRYGVERA LAALPQGADA VLTDALAVLD
EDERVNRAAS RHAAELLLRR CPPRPLRVLT HCNTGRLATV AWGTALGTVR HLHADGRIDQ
VLVDETRPLL QGSRLTAWEL ADEGIPHRVL PDGAAAAAMA RGMVDCVVVG ADRVAANGDT
ANKIGTYGLA VAAAHHDIPF VVVATESTLD RSLPDGGGIV IEERAAEEVT QLAGVPVAPE
GSAVFNPAFD VTPVALLTAV VTENGVFATG RGT
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