Gene Svir_08580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08580 
Symbol 
ID8386195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp878200 
End bp879477 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content68% 
IMG OID644974949 
Productalcohol dehydrogenase, class IV 
Protein accessionYP_003132745 
Protein GI257054913 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.237673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCT ATGTGCATGA AACCGTGTTC ACCTGGGGCG CGACCCCGCT GAAGTTCGGA 
GCCGGGGCCG TCGATGAGAT CGGTTACGAC CTCGCCCAAC AGGACATCCG GCGGGTGTTG
CTCATCACCG ACCCCGGTAT CGCGGCCACC GGAGTCCCCC AGCGGATCGC CGACGCCGCC
AAGGCCGCCG GACTCACCGT CGAGATCTAC GACGGCGTAC ACGTCGAACC GACCGACGCC
AGCGTCCTCG CCGCCGTCGA ATTCGCCCGT CAGTCCGAGT GGGACGGCTT CGTCGGAGTG
GGCGGGGGTT CGGCCATCGA CACGGCCAAG GCGGTCAACC TGCTCACCAC CTACCCGGCG
GACCTGTTCG ACTACGTCAA CAAGCCCATC GGCGCGGCGA AGGCCCCGCC CGGGCCGCTC
AAGCCCCTCG TCGCCGTGCC CACCACCGCG GGAACAGGGT CCGAGACCAC ACCGGTGTGC
ATCATGGACT TCCTCGAGCT CAAGGTGAAG TCCGGCATCA GTCACCCCGC GCTGAGGCCG
ACCATGGCCG TCATCGACCC GCTACTCACC CTGTCGATGC CGCCCCGCGT CACGGCCGCC
AGTGGTATGG ACGTGCTCTG CCACGCCCTG GAGTCCTACA CCGCCAAACC GTTCCACTCC
TTCTCCCGAC ACACCCCCGA GAGCCGGGTC GCCTACAACG GTGCCAACCC CATTTCGGAC
ACCTGGACCG AAAAAGCCCT CCACCTGCTC GCGCGATCCT TCCGCAAGGC CGTGCTCAAC
GGCGGTGACC TGGAGGCGCG TACGGACATG ATGCTGGCCG CCACGTTCGC CGGGATGGGA
TTCGGCAACG CGGGCGTGCA CATCCCACAC GCGTGCGCCT ATCCGATCGC GGGGCGGGTA
CGCGACTACC GCCCCGCCGA CTATCCGCAG GAGGAGCCGC TCGTACCGCA CGGCGAGTCG
GTCGCCCTGA CCGCGCCCGC TGCCTTCCGG TTCACCTTCC CCACCGATCC CGACAAGCAC
CTGCACGCCG CGCGCATCCT CGCCCCGACG CTGCCCGAGC AACGCGACCC GCGCGAACAG
CTGCCATCCG CGTTAGCCTC GCTCATGCGG GACATCGGCT TGCCCAACGG GCTCGGCGGT
GTCGGCTACG ACACTTCGGA CGTGCCCGAT CTGGTGGAGG GGGCCATGAA GCAACAGCGC
CTGCTGACCA TCTCCCCCCG TCCGGTACGG GAGCACGACC TCGAAGCGAT CCTCCTCGAC
TCCCTCGAGA ACTGGTGA
 
Protein sequence
MTVYVHETVF TWGATPLKFG AGAVDEIGYD LAQQDIRRVL LITDPGIAAT GVPQRIADAA 
KAAGLTVEIY DGVHVEPTDA SVLAAVEFAR QSEWDGFVGV GGGSAIDTAK AVNLLTTYPA
DLFDYVNKPI GAAKAPPGPL KPLVAVPTTA GTGSETTPVC IMDFLELKVK SGISHPALRP
TMAVIDPLLT LSMPPRVTAA SGMDVLCHAL ESYTAKPFHS FSRHTPESRV AYNGANPISD
TWTEKALHLL ARSFRKAVLN GGDLEARTDM MLAATFAGMG FGNAGVHIPH ACAYPIAGRV
RDYRPADYPQ EEPLVPHGES VALTAPAAFR FTFPTDPDKH LHAARILAPT LPEQRDPREQ
LPSALASLMR DIGLPNGLGG VGYDTSDVPD LVEGAMKQQR LLTISPRPVR EHDLEAILLD
SLENW