Gene Svir_08520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08520 
Symbol 
ID8386189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp871588 
End bp872403 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content75% 
IMG OID644974943 
Productcobalamin-5-phosphate synthase 
Protein accessionYP_003132739 
Protein GI257054907 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCG CGGCACCACC GGTGCGGGAC GGTCTGCGCA TGGCGTTCGG CACGCTGACG 
GCGGTACCGG TGCCCCCTCC GCGGGCCGTG GACCGACGGG TGGCCGGAGT CGCGATGACG
CTGGCGCCGT TGGCCGCGCT CTTTCTGGCC GCACTGGCGG TGCCGGCCGT CCTCCTCGGA
ACCTGGCTGG GTCTGCCGCC GTTGGTGTCG GCGGTCGCCG CGATCGGCGT GGTCACGTTC
GGTAGCCGAG GACTGCACCT CGACGGGCTC GCCGACACCG CCGACGGTCT GGCGGCCTCG
TACGACCGGG ACCGGGCACT GGACGTCATG CGTCGCGGTG ATGTGGGACC GACCGGGGTC
GTGACCCTGG TGCTCGCGGT GCTGACGCAG GTCGCCGCGC TGGCCGGGAT CGTGGCGAGC
GGGCCCACTC CGGCGACCGC TGTCAGCGCC ATGGCCATCG CCGTGGTGGC GGGACGGGGC
ATGCTGCCGT TGTGTTGTGT GCGCGGGCTG CCCTCGGCTC GCCCCGAGGG GCTCGGCGCC
GCCGTCGCGG GCAGCGTGCC TCCGGGAGTG GCCGCGGTGG TCGCGGCTCT GGTCATCGCC
GCGGCCGCCG TGGTCACCGC GGTGGTGCCG GGGCCCCCGT GGTGGCAGGG CGTGCTCGCA
GTGCTGTTGG GCTGGCTGGC CGCGGGAGCG CTGCTGGGAC ACGCGGTACG CCGTTTCGGC
GGCGTGACCG GCGACGTCCT GGGCGCGTGC GTCGAGACGG CGACGTTGGT GACACTCGTG
GTGTTCTCCG CCTCCGGCCT CGACCCGCTG CGATGA
 
Protein sequence
MSRAAPPVRD GLRMAFGTLT AVPVPPPRAV DRRVAGVAMT LAPLAALFLA ALAVPAVLLG 
TWLGLPPLVS AVAAIGVVTF GSRGLHLDGL ADTADGLAAS YDRDRALDVM RRGDVGPTGV
VTLVLAVLTQ VAALAGIVAS GPTPATAVSA MAIAVVAGRG MLPLCCVRGL PSARPEGLGA
AVAGSVPPGV AAVVAALVIA AAAVVTAVVP GPPWWQGVLA VLLGWLAAGA LLGHAVRRFG
GVTGDVLGAC VETATLVTLV VFSASGLDPL R