Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_08450 |
Symbol | |
ID | 8386182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 861399 |
End bp | 862667 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644974936 |
Product | hypothetical protein |
Protein accession | YP_003132732 |
Protein GI | 257054900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGAACA TCTTCGTGCT CGCCCTGAAC GAAGGGAATC TGCGCACGCT GCACGCCGTG CCCAAAGCCG AGGATTACCG GTTCCACCAG CTGCTCGCCG TCGACGACAT CCAGTTCGGC CAGGTCGACA TCGGTCGACT GTTCGACGCC GCGGTGTCCC AGCTGGATGA ATTCCCCGGC CCGATCGACG CGATCGTGTC CTACTGGGAT TTCCCGTCCT CCGTACTGCA CGTGCTGTTG TGCGAGCATT ACGGCCTTCC CGGGCCGTCC TTGGAGTCGG TGGTGAAGTG CGAACACAAG TACTGGTCCC GGCTGGAACA ACGGGAGTCG ATCGACGAGT ACCCGCTTTT CGGCATCGTC GATCTGCGCG AGCGACGACC GACCCCGCCC GAAGGCATGC GTTATCCGAT GTGGCTGAAG CCGGTGAAGT CGTACTCGTC GAATCTGGCG TTCTTGGCCC GGGACGAAGC CGAGTTCGAG GACGCGGTGC GTCGTATCCG TGCGGGGGTC GGACGTATCG GTAAGGCGTT CGACGCGGTC CTGCGACTCC TCGACCTGCC CGCTGCGATC AGGGAGGTGG GCGGGCAGGC GTGTCTTGCG GAGGAGGCGT TGTCCGGCGA GCAGTGCGCC ACCGAGGGAT ACGTGCACAA CGGCGACGTC GTGGTGTACG GCGTGCTCGA CTCGATCGAC TACCCCGAGA GCCCGTCGTT CCTCCGACAC CAGTATCCGT CGCAGCTACC GGAAGCGGTA CAGCAGAGGC TGCGGGACGT CTCGCGCCGG GTGATCACGC GGGTCGGTTT GGACGAGTCG ACGTTCTCCA TCGAGTTCTT CTACGACCCC CGGTCCGGCG GCGTCACCCT GTTGGAGATC AATCCGCGGC ATTCGCAGTC GCACGCCGAG TTGTTCGAGT TCGTCGACGG CTGCCCCAAC CACTACGCGA TGGTGCAGCT GGGGCTCGGG CGCGCTCCCG AACTCCCCTC CGGGGAGGGG CCGTACGACA TCGCGGCCAA GTGGTACCAC CGCCGGTTCT CCGATGCGCT GGTGTCCTCG GTACCGGGCC CGGAGGACAT CGAACGCCTG CGGGGTGAGC TCGACGGCGT CGAGGTCGAT GTGATCGCGC AAGAGGGTCG GTGGTTGTCC GAGTTGCCGA GCCAGGACAG CTACAGCTAC GAGCTCGCCC ACGTGTTCGT CGGCGCTCGG GATGAGCGGG AACTGGTGGA CAAGTACGCG CGCTGTGTCG AAGGCCTGCC CTTCGAGTTC GCCGCCTGA
|
Protein sequence | MKNIFVLALN EGNLRTLHAV PKAEDYRFHQ LLAVDDIQFG QVDIGRLFDA AVSQLDEFPG PIDAIVSYWD FPSSVLHVLL CEHYGLPGPS LESVVKCEHK YWSRLEQRES IDEYPLFGIV DLRERRPTPP EGMRYPMWLK PVKSYSSNLA FLARDEAEFE DAVRRIRAGV GRIGKAFDAV LRLLDLPAAI REVGGQACLA EEALSGEQCA TEGYVHNGDV VVYGVLDSID YPESPSFLRH QYPSQLPEAV QQRLRDVSRR VITRVGLDES TFSIEFFYDP RSGGVTLLEI NPRHSQSHAE LFEFVDGCPN HYAMVQLGLG RAPELPSGEG PYDIAAKWYH RRFSDALVSS VPGPEDIERL RGELDGVEVD VIAQEGRWLS ELPSQDSYSY ELAHVFVGAR DERELVDKYA RCVEGLPFEF AA
|
| |