Gene Svir_08450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08450 
Symbol 
ID8386182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp861399 
End bp862667 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content65% 
IMG OID644974936 
Producthypothetical protein 
Protein accessionYP_003132732 
Protein GI257054900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAACA TCTTCGTGCT CGCCCTGAAC GAAGGGAATC TGCGCACGCT GCACGCCGTG 
CCCAAAGCCG AGGATTACCG GTTCCACCAG CTGCTCGCCG TCGACGACAT CCAGTTCGGC
CAGGTCGACA TCGGTCGACT GTTCGACGCC GCGGTGTCCC AGCTGGATGA ATTCCCCGGC
CCGATCGACG CGATCGTGTC CTACTGGGAT TTCCCGTCCT CCGTACTGCA CGTGCTGTTG
TGCGAGCATT ACGGCCTTCC CGGGCCGTCC TTGGAGTCGG TGGTGAAGTG CGAACACAAG
TACTGGTCCC GGCTGGAACA ACGGGAGTCG ATCGACGAGT ACCCGCTTTT CGGCATCGTC
GATCTGCGCG AGCGACGACC GACCCCGCCC GAAGGCATGC GTTATCCGAT GTGGCTGAAG
CCGGTGAAGT CGTACTCGTC GAATCTGGCG TTCTTGGCCC GGGACGAAGC CGAGTTCGAG
GACGCGGTGC GTCGTATCCG TGCGGGGGTC GGACGTATCG GTAAGGCGTT CGACGCGGTC
CTGCGACTCC TCGACCTGCC CGCTGCGATC AGGGAGGTGG GCGGGCAGGC GTGTCTTGCG
GAGGAGGCGT TGTCCGGCGA GCAGTGCGCC ACCGAGGGAT ACGTGCACAA CGGCGACGTC
GTGGTGTACG GCGTGCTCGA CTCGATCGAC TACCCCGAGA GCCCGTCGTT CCTCCGACAC
CAGTATCCGT CGCAGCTACC GGAAGCGGTA CAGCAGAGGC TGCGGGACGT CTCGCGCCGG
GTGATCACGC GGGTCGGTTT GGACGAGTCG ACGTTCTCCA TCGAGTTCTT CTACGACCCC
CGGTCCGGCG GCGTCACCCT GTTGGAGATC AATCCGCGGC ATTCGCAGTC GCACGCCGAG
TTGTTCGAGT TCGTCGACGG CTGCCCCAAC CACTACGCGA TGGTGCAGCT GGGGCTCGGG
CGCGCTCCCG AACTCCCCTC CGGGGAGGGG CCGTACGACA TCGCGGCCAA GTGGTACCAC
CGCCGGTTCT CCGATGCGCT GGTGTCCTCG GTACCGGGCC CGGAGGACAT CGAACGCCTG
CGGGGTGAGC TCGACGGCGT CGAGGTCGAT GTGATCGCGC AAGAGGGTCG GTGGTTGTCC
GAGTTGCCGA GCCAGGACAG CTACAGCTAC GAGCTCGCCC ACGTGTTCGT CGGCGCTCGG
GATGAGCGGG AACTGGTGGA CAAGTACGCG CGCTGTGTCG AAGGCCTGCC CTTCGAGTTC
GCCGCCTGA
 
Protein sequence
MKNIFVLALN EGNLRTLHAV PKAEDYRFHQ LLAVDDIQFG QVDIGRLFDA AVSQLDEFPG 
PIDAIVSYWD FPSSVLHVLL CEHYGLPGPS LESVVKCEHK YWSRLEQRES IDEYPLFGIV
DLRERRPTPP EGMRYPMWLK PVKSYSSNLA FLARDEAEFE DAVRRIRAGV GRIGKAFDAV
LRLLDLPAAI REVGGQACLA EEALSGEQCA TEGYVHNGDV VVYGVLDSID YPESPSFLRH
QYPSQLPEAV QQRLRDVSRR VITRVGLDES TFSIEFFYDP RSGGVTLLEI NPRHSQSHAE
LFEFVDGCPN HYAMVQLGLG RAPELPSGEG PYDIAAKWYH RRFSDALVSS VPGPEDIERL
RGELDGVEVD VIAQEGRWLS ELPSQDSYSY ELAHVFVGAR DERELVDKYA RCVEGLPFEF
AA