Gene Svir_08000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08000 
Symbol 
ID8386137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp821928 
End bp822935 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID644974891 
Producthypothetical protein 
Protein accessionYP_003132687 
Protein GI257054855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCTGA CCGTGCTGTT CGCGGTACTC GCCGCTTTCT GCAACGCGCT CGGTTCGGTG 
CTGCAACGGA AGGGGACCCG AAGCCAACCC TTCGAGGAGG CGATGTCGGT CCGCTTGTTG
TGGAGGTTGG TGCACCAGCT GCCGTGGTTG GGCGGCATCG TCTTCATGCT CGGCGGTTTC
GGTCTCCAGG TGGCGGCGCT GTCCACGGGA CCCATCTCGC TCGTGCAACC GGTGTTGGTG
GCCGAGATGG GGCTCACGCT CGTGTTGTCG GCCATGCTGC TCGGTTCCAG CATGCACACT
CGCGAGTGGA CGGCCGTGTT CGGCATGAAC ACGGGGATCG CGTTGTTGTT GGTGGCCCTG
CGTCCGACCG GGGGCGACAC CCGCGGAGTG ACCGGGCCGA CGTGGGCACT GGGGTGCCTC
GTGACCCTGG CGGTCATCGT CGGGACCGTG GTCCTGGCAC ACCGGTACCG CTACGCTCAC
CGCGCCGCCT ACCTGGGCAT CGCGGCGGGC ATGTTCTTCG GCTTCATCGC CGTACTCGTG
TCCGGCGTCA CGGGGGCCTT CGCGGGCGGA CCGAAAGCCG TGTTGTCGGC CTGGCAGACC
TACGCGCTCA TCGTGGCGGG ACCGACCGGC TTCTTCCTGC TCCAGGTGAC GTTGCGCGCG
GGCACTTTAG TCGCCTCCCA GCCCGGGCTG ACGTTGGCCA ACCCGTTGGT CGGCATCGGC
TGGGGTGTCG CGGTGTTCGG CGAGGACGTG CGCGGTGGCG GTTGGATCGC CCTCGAGGTC
CTGGGCTTTT CCCTCATCGC GGCGTGCACC CTCCTGCTGG CGCGGTCCGC GTCACTGCGC
GGTTCCGCGG GCGCTTACGA GGAGACCGAG GGCAGGGCCG ACGGAGAGGA CGCGGGCAAC
ACCGGGGAAT CCGGGTTCTT GGAGGTGGCC GAGGACGCCG AGGACACGGC GGTCGAGTCC
GGTGTCGACA CCGACGCGAG TTCGGACCGT AACCAGGAGA ACCACTGA
 
Protein sequence
MALTVLFAVL AAFCNALGSV LQRKGTRSQP FEEAMSVRLL WRLVHQLPWL GGIVFMLGGF 
GLQVAALSTG PISLVQPVLV AEMGLTLVLS AMLLGSSMHT REWTAVFGMN TGIALLLVAL
RPTGGDTRGV TGPTWALGCL VTLAVIVGTV VLAHRYRYAH RAAYLGIAAG MFFGFIAVLV
SGVTGAFAGG PKAVLSAWQT YALIVAGPTG FFLLQVTLRA GTLVASQPGL TLANPLVGIG
WGVAVFGEDV RGGGWIALEV LGFSLIAACT LLLARSASLR GSAGAYEETE GRADGEDAGN
TGESGFLEVA EDAEDTAVES GVDTDASSDR NQENH