Gene Svir_07730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07730 
Symbol 
ID8386111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp799120 
End bp799989 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content68% 
IMG OID644974867 
Productpredicted TIM-barrel fold metal-dependent hydrolase 
Protein accessionYP_003132664 
Protein GI257054832 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGGGC TGGTGGATCT CCACGTGCAT TTCCTGCCCG AACGCGTCCT GCGCAAGGTG 
TGGGCGTATT TCGACGACGC CGAGACGCAT TACGGTTTGC GCTGGCCGGT GCGCTACCGG
TTGTCCGAGT CCGAACGGGT CGCGGTGCTA CGGAAACTGG GGGTGCGAGC CTTCGCCCCG
CTGGTGTATC CGCACAAACC GGATATGGCC GCGTGGCTGA ACCAGTGGAT GCGGGAGTTC
GTCGCCGAGG TGCCGGAGGC GGTGCTGACG GCGACGTTGT ATCCGGAGCC GTCCGTCGAT
GCCTACGTGG CCGAAGCGCT GACCGCGGGG GCGCGGTGCT TCAAAGCCCA CGTGCAGGTG
GGTGCGTACG ACCCGCGCGA CGAGGTGCTC CACCGAGCGT GGGGATTGCT CGCCGAGGCG
CAGGTCCCCG TCGTCATTCA CTGCGGGCAC GGGCCGTTAC GGGGGGAGTA CACCGGTGTC
GGTGTTTTCG AACAGGTGCT GCGACGGCAC CCGCGGCTCG TGGCCGTGCT CGCTCACGCG
GGCATGCCGG AGTACGACGA GGCGATAGCG CTGGTCGAGC GGTACCCCAA TGTCTACCTG
GACACCACGA TGGTCGGGGT TCCGTTCACG GAAGGGTTCA TGCCGACCCC GCCGGATTGG
CCCAGCCGTC TTGCCGGGAT CGCCGACCGC GTGGTGCTCG GTACCGACTT CCCGAACATC
CCCTACCCCT ACGCCGCCCA GCTCCAGGCC GTGGCCCGTT GGGCCGAGGC CGACCAGGGG
TTGGGCGACC CCTTCCTGCG CGCGGTGCTG CAGGACACAC CGTCCCGGTT ACTGAGGTTG
GTGCCGGAAG CGACCGGCGT GGGCGGATGA
 
Protein sequence
MDGLVDLHVH FLPERVLRKV WAYFDDAETH YGLRWPVRYR LSESERVAVL RKLGVRAFAP 
LVYPHKPDMA AWLNQWMREF VAEVPEAVLT ATLYPEPSVD AYVAEALTAG ARCFKAHVQV
GAYDPRDEVL HRAWGLLAEA QVPVVIHCGH GPLRGEYTGV GVFEQVLRRH PRLVAVLAHA
GMPEYDEAIA LVERYPNVYL DTTMVGVPFT EGFMPTPPDW PSRLAGIADR VVLGTDFPNI
PYPYAAQLQA VARWAEADQG LGDPFLRAVL QDTPSRLLRL VPEATGVGG