Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_07730 |
Symbol | |
ID | 8386111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 799120 |
End bp | 799989 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974867 |
Product | predicted TIM-barrel fold metal-dependent hydrolase |
Protein accession | YP_003132664 |
Protein GI | 257054832 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGGGC TGGTGGATCT CCACGTGCAT TTCCTGCCCG AACGCGTCCT GCGCAAGGTG TGGGCGTATT TCGACGACGC CGAGACGCAT TACGGTTTGC GCTGGCCGGT GCGCTACCGG TTGTCCGAGT CCGAACGGGT CGCGGTGCTA CGGAAACTGG GGGTGCGAGC CTTCGCCCCG CTGGTGTATC CGCACAAACC GGATATGGCC GCGTGGCTGA ACCAGTGGAT GCGGGAGTTC GTCGCCGAGG TGCCGGAGGC GGTGCTGACG GCGACGTTGT ATCCGGAGCC GTCCGTCGAT GCCTACGTGG CCGAAGCGCT GACCGCGGGG GCGCGGTGCT TCAAAGCCCA CGTGCAGGTG GGTGCGTACG ACCCGCGCGA CGAGGTGCTC CACCGAGCGT GGGGATTGCT CGCCGAGGCG CAGGTCCCCG TCGTCATTCA CTGCGGGCAC GGGCCGTTAC GGGGGGAGTA CACCGGTGTC GGTGTTTTCG AACAGGTGCT GCGACGGCAC CCGCGGCTCG TGGCCGTGCT CGCTCACGCG GGCATGCCGG AGTACGACGA GGCGATAGCG CTGGTCGAGC GGTACCCCAA TGTCTACCTG GACACCACGA TGGTCGGGGT TCCGTTCACG GAAGGGTTCA TGCCGACCCC GCCGGATTGG CCCAGCCGTC TTGCCGGGAT CGCCGACCGC GTGGTGCTCG GTACCGACTT CCCGAACATC CCCTACCCCT ACGCCGCCCA GCTCCAGGCC GTGGCCCGTT GGGCCGAGGC CGACCAGGGG TTGGGCGACC CCTTCCTGCG CGCGGTGCTG CAGGACACAC CGTCCCGGTT ACTGAGGTTG GTGCCGGAAG CGACCGGCGT GGGCGGATGA
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Protein sequence | MDGLVDLHVH FLPERVLRKV WAYFDDAETH YGLRWPVRYR LSESERVAVL RKLGVRAFAP LVYPHKPDMA AWLNQWMREF VAEVPEAVLT ATLYPEPSVD AYVAEALTAG ARCFKAHVQV GAYDPRDEVL HRAWGLLAEA QVPVVIHCGH GPLRGEYTGV GVFEQVLRRH PRLVAVLAHA GMPEYDEAIA LVERYPNVYL DTTMVGVPFT EGFMPTPPDW PSRLAGIADR VVLGTDFPNI PYPYAAQLQA VARWAEADQG LGDPFLRAVL QDTPSRLLRL VPEATGVGG
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