| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07640 |
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| Symbol | |
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| ID | 8386102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 789818 |
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| End bp | 790963 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974858 |
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| Product | predicted secreted protein containing a PDZ domain protein |
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| Protein accession | YP_003132656 |
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| Protein GI | 257054824 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.574561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACT CCCCGGACAA GGCGGTACCT GCCGGAGAAA CCACCGCACA GTCCACCGGC
ACCGTGCGTG ACCGGCTGTC GAGTGACACG GATTCGCGCC GGGGTGGCCG CCCGCGATTG
AGCAGACGTG GCTGGACCAT GTTGGCCAGT GGTGTCCTGG TGCTCACGTT CGCCCTGCTG
GGAGCGTTCG TGCGGGTGCC GTACGTGGCG TTGGGCCCCG GGCCGACGTA CGACACGTTG
GGAGCGGTGG ACGGCACCGA GGTGATCAGC GTCGACGGCA CGCGCACCTA CGAGACCGAC
GGTGAATTGC GTATGACGAC GGTCTCGCTG AACGACAACA TGACCTTGTT CGGAGCTCTC
GGTATGTGGC TCAGCGGTCG TTACGCGCTC GCGCCGAGGG AGGAGTACTT CCTGCCGGGG
CAGTCCGACG AGGAGGTGCG GCAGGAGAAT CTCCGGCAGT TCCGTAGCTC GCAGAGCAAC
GCCGAGGTGG CGGCGCTGCG ACGACTCGGT TATCCGGTGC AGGTCGTGGT CGAGCAGGTC
GTCGACGACA GTCCCGCCGC GGAGGTCTTG CAGCCGGGCG ACCGCATCGT TCGGATCGAC
GGCAAGGACG TCACCGACTC CGAGTCGGTG CGGAAGGTGC TCTCCGGAAC CCGACCGGGG
CAGACGGTGA CGGTGGTGTT CCAGCGCGAC GGCGGGTCGG AGCGTACGGA GTCGGTGACA
CTGGCCCGAC ACCCCGAGAG CCCCCACGGT TTCATCGGAA TCCAGCCCGC GGACAGGGCC
GATGCGCCTT TCGAGGTGGA CATCGCACTG GAGGACGTCG GTGGGCCTTC GGCGGGTCTC
ATGTTCGCGC TGGCGATCTT GGACGAGCTG ACCCCGGGGG CCATGACGGG TGGGCAGAGC
ATCGCGGGTA CCGGGACCAT CGACGCGGAG GGCAACGTCG GCGAGATCGG CGGTATCTCG
TTCAAGCTGG TCGCCGCCCA CGAGGCCGGA GCCGACGCGT TCCTGGTACC GGAGGGCAAT
TGCGGCGAGG CGGTCGCCGC CGCGCCGGAG GGGCTCACGT TGGTGCGGGT CGCCACGCTC
GACGACGCCG TGAGCGCGGT GGAGTCGTTG GCGGAAGGAA AGTCGGCGCC GTCCTGCACC
GGGTGA
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| Protein sequence | MSDSPDKAVP AGETTAQSTG TVRDRLSSDT DSRRGGRPRL SRRGWTMLAS GVLVLTFALL
GAFVRVPYVA LGPGPTYDTL GAVDGTEVIS VDGTRTYETD GELRMTTVSL NDNMTLFGAL
GMWLSGRYAL APREEYFLPG QSDEEVRQEN LRQFRSSQSN AEVAALRRLG YPVQVVVEQV
VDDSPAAEVL QPGDRIVRID GKDVTDSESV RKVLSGTRPG QTVTVVFQRD GGSERTESVT
LARHPESPHG FIGIQPADRA DAPFEVDIAL EDVGGPSAGL MFALAILDEL TPGAMTGGQS
IAGTGTIDAE GNVGEIGGIS FKLVAAHEAG ADAFLVPEGN CGEAVAAAPE GLTLVRVATL
DDAVSAVESL AEGKSAPSCT G
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