Gene Svir_07340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07340 
Symbol 
ID8386072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp754530 
End bp755321 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID644974829 
ProductABC-type Fe3+-hydroxamate transport system, periplasmic component 
Protein accessionYP_003132630 
Protein GI257054798 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACG ATCTGGGTGC CGACGTTCCA CTGTCCGGAC CGCCGAAGCG AGTGGTGTCG 
TTGGTTCCCT CGTTGACGGA GGCGGTGGCC ACGACCGTGC CCGGCGTGTT GGTCGGGGCC
ACCGATTACT GCACGCATCC CGCCGAGCTG GACGTGGCGA GGGTGGGCGG GTCGAAGTAC
CCGAAGGTCG ACGCCGTGCT CGACTGCGCA CCCGACCTTG TGCTGGGTAA CTCGGAGGAG
AACCGACCCG AGGACGTGCG CAGGCTACGG GAAGCGGGCG TGCCCGTGTG GGTGATGGCG
GCGCCGGCCA CGGTGCCCAT GGCGCTGGAC TCGCTGCGTA CGTTGTTCAC CCGGGTGTTC
GACGTGGATG TTCCCGCGTG GCTCACCTCC TCCGAGGAGG CGTGGCGGGA GACCCGGCCG
GTGCGCGCGC GGGCGGTGGT GCCGGTGTGG CGCAAACCGT GGGTGGTACT GGGCCGTGAC
ACCTTCGGAG GCGACGTGCT GCGCAGGCTC GGGATCGACA ACGTCTACGC CGACGGCCCC
AGTCGTTCCG ATGCCGACCG CTACCCGCGG CCGACGGTGG ACGAACTGCG GGCTCGCTTC
GCGGAAGGGG AAGCGGATCT GTTGGTCCTC CCCGACGAGC CGTACGAATT CACCGACACC
GACGGACCCG ACCACTTTCC GGGTGTGCCG TACGTGTTGG TGTCCGGGAG GTTGCTCAAC
TGGTACGGCC CGTCGCTGGT CGAAGCCCAT AGCGAGCTCT CGGCCGCACT GGCCGATCTC
CCGACGCGAT AA
 
Protein sequence
MKDDLGADVP LSGPPKRVVS LVPSLTEAVA TTVPGVLVGA TDYCTHPAEL DVARVGGSKY 
PKVDAVLDCA PDLVLGNSEE NRPEDVRRLR EAGVPVWVMA APATVPMALD SLRTLFTRVF
DVDVPAWLTS SEEAWRETRP VRARAVVPVW RKPWVVLGRD TFGGDVLRRL GIDNVYADGP
SRSDADRYPR PTVDELRARF AEGEADLLVL PDEPYEFTDT DGPDHFPGVP YVLVSGRLLN
WYGPSLVEAH SELSAALADL PTR