Gene Svir_07190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07190 
Symbol 
ID8386057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp740207 
End bp740944 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID644974815 
ProductZn-ribbon protein, possibly nucleic acid-binding 
Protein accessionYP_003132616 
Protein GI257054784 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.274676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCAG AACCCGCCGT GCAGCGCCAA TTGCTCGACC TCGCCGAGGT CGACGCCGAG 
CTGGCTCGGG TAGCACATCG TCGTCGCAAC CTGCCCGAAC TCGCCGAGAT CACCGAGGCC
GAGAAGCGAC TGCGGGAGCG TCGGGACGCG CTGGTGGCCG CGCAGACGAC GGCGTCGGAC
CTCGAACGCG AGGTCAGCAA ACAGGAACGC GAGATCGAGT CGGTGCGGGC GCGTGCCGAA
CGGGACCGCA AACTCATGGA GTCCGGCTCG GTCTCGGCCA AGCAGCTCGC CGATCTGGAA
CGGGAATTGG AGACCCTGGC GCGTAGGCAG TCGGTGCTGG AGGACGACCA GCTGGAGTTG
ATGGAACGCA AGGAGGCCGT CGACGCCGAC GTCCAGCGCA CCGCCGCCGA AGTGGACAAG
GCGGAGCAGG AGCTGGCCGA TGCGCAGCGG CGGCGTGACG AGGCGCTGGC CGACCTCGAC
ACCACCCAGG CCCGACGGGA GGCCGACCGG AAGAACCTGG TGCCGAAGCT GCCGGAGAAC
CTGTTGGCCC TCTACGAGCG TGTCCGCGCC CACAAGGGCA TCGGCGCGGC GCTGTTGAAG
TCGCGGCGCT GCGGAGCCTG TCAACTCGAA CTCGATCGCA GCAGCATCGC CGAGATCAAG
GCCGCGCCCG ACGACGAGGT CGTGCAGTGC GAGAACTGTG ACGCGATCCT CGTGCGCACT
CCGGAGTCCG GACTGTGA
 
Protein sequence
MKAEPAVQRQ LLDLAEVDAE LARVAHRRRN LPELAEITEA EKRLRERRDA LVAAQTTASD 
LEREVSKQER EIESVRARAE RDRKLMESGS VSAKQLADLE RELETLARRQ SVLEDDQLEL
MERKEAVDAD VQRTAAEVDK AEQELADAQR RRDEALADLD TTQARREADR KNLVPKLPEN
LLALYERVRA HKGIGAALLK SRRCGACQLE LDRSSIAEIK AAPDDEVVQC ENCDAILVRT
PESGL