Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_07190 |
Symbol | |
ID | 8386057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 740207 |
End bp | 740944 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974815 |
Product | Zn-ribbon protein, possibly nucleic acid-binding |
Protein accession | YP_003132616 |
Protein GI | 257054784 |
COG category | [R] General function prediction only |
COG ID | [COG1579] Zn-ribbon protein, possibly nucleic acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.274676 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCAG AACCCGCCGT GCAGCGCCAA TTGCTCGACC TCGCCGAGGT CGACGCCGAG CTGGCTCGGG TAGCACATCG TCGTCGCAAC CTGCCCGAAC TCGCCGAGAT CACCGAGGCC GAGAAGCGAC TGCGGGAGCG TCGGGACGCG CTGGTGGCCG CGCAGACGAC GGCGTCGGAC CTCGAACGCG AGGTCAGCAA ACAGGAACGC GAGATCGAGT CGGTGCGGGC GCGTGCCGAA CGGGACCGCA AACTCATGGA GTCCGGCTCG GTCTCGGCCA AGCAGCTCGC CGATCTGGAA CGGGAATTGG AGACCCTGGC GCGTAGGCAG TCGGTGCTGG AGGACGACCA GCTGGAGTTG ATGGAACGCA AGGAGGCCGT CGACGCCGAC GTCCAGCGCA CCGCCGCCGA AGTGGACAAG GCGGAGCAGG AGCTGGCCGA TGCGCAGCGG CGGCGTGACG AGGCGCTGGC CGACCTCGAC ACCACCCAGG CCCGACGGGA GGCCGACCGG AAGAACCTGG TGCCGAAGCT GCCGGAGAAC CTGTTGGCCC TCTACGAGCG TGTCCGCGCC CACAAGGGCA TCGGCGCGGC GCTGTTGAAG TCGCGGCGCT GCGGAGCCTG TCAACTCGAA CTCGATCGCA GCAGCATCGC CGAGATCAAG GCCGCGCCCG ACGACGAGGT CGTGCAGTGC GAGAACTGTG ACGCGATCCT CGTGCGCACT CCGGAGTCCG GACTGTGA
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Protein sequence | MKAEPAVQRQ LLDLAEVDAE LARVAHRRRN LPELAEITEA EKRLRERRDA LVAAQTTASD LEREVSKQER EIESVRARAE RDRKLMESGS VSAKQLADLE RELETLARRQ SVLEDDQLEL MERKEAVDAD VQRTAAEVDK AEQELADAQR RRDEALADLD TTQARREADR KNLVPKLPEN LLALYERVRA HKGIGAALLK SRRCGACQLE LDRSSIAEIK AAPDDEVVQC ENCDAILVRT PESGL
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