| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07070 |
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| Symbol | |
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| ID | 8386045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 723518 |
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| End bp | 726982 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974804 |
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| Product | alpha-glucuronidase |
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| Protein accession | YP_003132605 |
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| Protein GI | 257054773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3661] Alpha-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.509455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGAC GTCCGCGACA CCGGAGAACG GCGTTCGCGC TGTTGGTTCC GGTTGCACTG
GTGGCGACCC TGCTGATCGG CGCACCCGCG ATTCCCGACG CGTCCGCGAC ACCCATCCGC
CCCGACTACA GCGGCTCGGA CCTGTGGCTG CATTACCCAA AGATCGAGGA CCCGGCCCTC
AAAAAGCGGT ACGCGAAGTC CGCCACCACC GTCATCGTGC AGAACGCCGG GAAGAACCCG
GTGCACCGGC ACACCCGTGA CCTGCCAATG GAACCGGGCG CACAGGAACA CCTCGTGACC
ACGCCCCTCG AAGCGGCCAA AGACGAGCTG GCAAGAGGAC TGAACGGGCT CCTCGGCAAG
AAGGTTCCCG TCCACACGAA GCCGGGTCAG CGTATTCCGG ACGGGGCCAT CGTGGTGGGC
ACACCGGAAA GCTCACAGAT CGTGCGCCGA CACGTCGACG CCGAGCAGCT ACGGGACTTG
GGGGACGAGG GCTATCTGAT CCGCTCGGCC TCCCGAGGGC GGCACGACTT CACCCTCATC
GCCGCCAACT CGGAGATCGG CGCGTTGTAC GGCACCTTCG CCTTCCTGCG GAGGATGCAG
ACGCAGCAGC CCATCACCGA CCTGGACATC ACCGAGAAAC CCAGGATCGC CCACCGGTAC
CTGAACTACT GGGAGACCGA ACGGCTCTAC GCCGGCAACG ATGCCACCGG GACGGGCGGC
TTGAACGGCG AGAACGGCGC CGTGTTCAAC TTCGCGGCCA CGGGCGAGAG CGCCGACCGC
AACCTGCCCC TCATCCTGGA CCGCTACCTG GTGGTCGCGC GCGCACTGGC CTCGGTGGGC
GTCAACGGCA TCACGATCAA CAACGTCAAC GCGGACAACG CCTACCTGAC GCGGGAGTAC
GTGGAGCAGA CGGCCGCGCT CGCCGATGCG CTGCGCCCCT ACGGGATCAA GGTCGGGTTG
TCCGTCAAGT ACACCGCGCC CACCGACGAA CGGTTCGCCC CCGACACCCT CACCGAGGAT
CAGCTCGACC CGTACGGCGA GGAGTTCCGC GACTGGTGGC ACCGGAAGGC CAAGCAGATC
CAGGAGGCGA TCCCCGACTT CATCGGCTTC ACCGTGAAGG CGAACTCCGA GGGACAACCG
GGCCCCCAGG ACTTCGGCTA CGACCACGGT GACGGCGCCA ACGGTATCGC CGCCGCGCTC
GAACCGCTCG GCATGACGGT GTACTGGCGC ACGTTCGTCT ACAACGCCGA CGTCGACAAC
GACCGGCTCA AGCGCGCGTA TCTGGAGTTC GGTCCCATCG ACGACGAGCC CCAGGACGAC
GGCTCGGTCG GACGGTTCGC CGACAACGTG TTCCTGCAGA CCAAGAACGG GCCACTGGAC
TTCCAGGCCC GCGAGCCGTT CAACCCGATG TTCGGCCGGT TGGAGAACAC CAACCAGGCG
CTGGAGCTGC AGATCACCCA GGAGTACACC GGCCAGAACA CGATGCTGTG CTACCTCGGG
CCCATGTGGC AGGAGGTGTT GAACACCGAC ACCTACGCCA CCGACGCCGC CGGCGAGCTC
CTCGACAAGC GACTGGTGGG CAACGTCGTG GACGGCACGG CCCAGGGCCA CTCGGACACG
GCGATCGTGG GGGTGGCGAA CCTCGGCAAC GCCGACAACC TCACGGGTCA CCACTTCTCA
CAGGCCAACC TCTTCGCCTT CGGTCGCCTG GCGTGGGACT GGACGCAGGA CTCCGCAGAC
ATCGCCACCG ACTGGGTGCG GATGACGTGG AGCAACGACG ACCACGTCGT CGACACGATC
GTGCGGATGA TGATGGGTTC CTGGGAAGCG CTGGTGAGCT ACCAGACCCC CTTGGGTGTC
GCGCACCAGT TCGCCGACGG CGAGCACTAC AAGCCGTACC CGTCCCAGTG GTTCATGAAG
GACGACTGGA GCCCGGTCTA CTACAACAAG GCCGACAGCG TCGGTCTCGG CTACGACCGC
TCCCCCACGG GCAGCAACTT CACCGCCCAG TACTTCCCCG TCCTGGCCGA GCGCTACGGC
GACATCGAGT CCACACCGGA GAATCTGCTG ATGTGGTTCC ACCACGTGCC GTGGGACCGC
CCGATGGCCA ACGGCCGGAT CTTCTGGGAC GAGCTCGTCC ACCGCTACCA GATGGGCGTG
CAGTACGTGA CCTGGATGCG GGAGACGTGG GACTCGCTGA AGCCGTTCAT CGACGACCGA
CGCTGGCGCG AGGTGCGGGA CAAGCTCGCC CAGCACGAGA TCGACGCGGC CGACTGGCGC
GACACCAATG TGCAGTACTG GCAGGAGTTC AGCGGGAGGG AGATCCCGGT GGACGACGGG
CCGGTGTCGG CGACCTTCGT CGTGAACGGC ACGGAACACG GCGGTTTCGA CCTCTCGGCC
GACAGTTATC GCATCCCGGT GCCCGCAGGC GGTTCCCCGG AGATCACCGA GGTGCGGACG
GCCGATCCCG ACGCCGACTA CGAGATCGTC TCGCAGGCCG ACGGCGTGCC GGGGACGGCG
CTGGTGAAGG TCACCGGACG CTCGTTCTTC GGTCCACTGG TGAAAAACTA CGTCCTCGAA
CTGGTACCCG ACACCACCTT GGAGAGCCTG TCGGTCAACG GCACCAGGCT GGACTCGTTC
GACCCGGACG TTCACCACTA CAACGCCCTG CTGCCGTCCG ATGTCGACTC CGTCGCGACG
GTGGAGGCCG TGGCCCACGA TCCCGCGGCG ACGGTACACA TCGAGCAGGC CGAACACCCC
ACGGGTCGAG CGGTCGTCAC CGTGACCAAC GGTGGGGCCT CCTCGGAGTA CACCGTGGAC
CTCGACATCG CCTTGAGCGG CTCCGACGAG TTCGACTCCG ACGAGCTCGA CGAGCGGTGG
GAGTGGGTGC GACACGACCC CGACGCCACG CGGCTCGACG ACGGGGCACT CGTCATCATC
CCGCAACGAG GTGGGCTGGA AACAGGCACC GAACCGGCGA GGAACATCGC GCTGCAGGAG
GTCAACGGCG ACTGGACGGC GGAGTCGAAG CTCGTCTTCT CCCGGCCTCT GGCCCACGAG
AACGAGCAGG GCGGTCTCAT CGCCTACGCC GATGACGACA ACTACGTCAA ACTCGCGTGG
GAGATGGCCG ACGAGGATGC CGAGATCAAC AAGCTCCACG TCGTGCTGCT GGCCGAGGAG
GACGGCAAGG CGACGAGCCT GGAGGTCACC GGTGCCGACG CCCAGCGCAT CGTGGGCGAG
GACGGAGCCA TCTGGCTTCG GCTCACGAAG TCCGGCGACA CCTACAAGGC GTACTACTCC
AACGACGGCG AGGTCTACCG GTACTTCGGG ACCACCACGC TGAGCGCCGA ACCCGAACGC
GCGGGGCTGA TGGCGTGGAG CGGGGACGCG ACGGCCACCG ACCTCGAGGT GGCGTTCGAC
TGGTTCCGTA TCCACAGCCG CGGCGATCGG GTACCGGCCC GCTGA
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| Protein sequence | MRRRPRHRRT AFALLVPVAL VATLLIGAPA IPDASATPIR PDYSGSDLWL HYPKIEDPAL
KKRYAKSATT VIVQNAGKNP VHRHTRDLPM EPGAQEHLVT TPLEAAKDEL ARGLNGLLGK
KVPVHTKPGQ RIPDGAIVVG TPESSQIVRR HVDAEQLRDL GDEGYLIRSA SRGRHDFTLI
AANSEIGALY GTFAFLRRMQ TQQPITDLDI TEKPRIAHRY LNYWETERLY AGNDATGTGG
LNGENGAVFN FAATGESADR NLPLILDRYL VVARALASVG VNGITINNVN ADNAYLTREY
VEQTAALADA LRPYGIKVGL SVKYTAPTDE RFAPDTLTED QLDPYGEEFR DWWHRKAKQI
QEAIPDFIGF TVKANSEGQP GPQDFGYDHG DGANGIAAAL EPLGMTVYWR TFVYNADVDN
DRLKRAYLEF GPIDDEPQDD GSVGRFADNV FLQTKNGPLD FQAREPFNPM FGRLENTNQA
LELQITQEYT GQNTMLCYLG PMWQEVLNTD TYATDAAGEL LDKRLVGNVV DGTAQGHSDT
AIVGVANLGN ADNLTGHHFS QANLFAFGRL AWDWTQDSAD IATDWVRMTW SNDDHVVDTI
VRMMMGSWEA LVSYQTPLGV AHQFADGEHY KPYPSQWFMK DDWSPVYYNK ADSVGLGYDR
SPTGSNFTAQ YFPVLAERYG DIESTPENLL MWFHHVPWDR PMANGRIFWD ELVHRYQMGV
QYVTWMRETW DSLKPFIDDR RWREVRDKLA QHEIDAADWR DTNVQYWQEF SGREIPVDDG
PVSATFVVNG TEHGGFDLSA DSYRIPVPAG GSPEITEVRT ADPDADYEIV SQADGVPGTA
LVKVTGRSFF GPLVKNYVLE LVPDTTLESL SVNGTRLDSF DPDVHHYNAL LPSDVDSVAT
VEAVAHDPAA TVHIEQAEHP TGRAVVTVTN GGASSEYTVD LDIALSGSDE FDSDELDERW
EWVRHDPDAT RLDDGALVII PQRGGLETGT EPARNIALQE VNGDWTAESK LVFSRPLAHE
NEQGGLIAYA DDDNYVKLAW EMADEDAEIN KLHVVLLAEE DGKATSLEVT GADAQRIVGE
DGAIWLRLTK SGDTYKAYYS NDGEVYRYFG TTTLSAEPER AGLMAWSGDA TATDLEVAFD
WFRIHSRGDR VPAR
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