Gene Svir_06850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06850 
Symbol 
ID8386023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp700580 
End bp701464 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID644974782 
Producthypothetical protein 
Protein accessionYP_003132583 
Protein GI257054751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.543826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0569801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCT CGACAGGTTG GTCCTCATCA GGTGGCGGCA CTCCGGGTGT CATCCCGCTG 
CGCCCGTTGT TGCTCGGGGA GATTCTGGAG GGCGCCGTAA CCACTCTGCG TAGGCACGCG
GGCGTGGTGT TCGGTTCCTC CGCCGTCGTC GCGTTGATCA GTGCTGTCAT CTACTTCGGT
GCCGACCTGT GGGTGTTCGA CGCCACCGAG CCCGCGCCGG TGATCGACAC CGAGGCCCCG
CCCGAGGAAC AGCTCGAGCA GGCCATGGCC CAGCTGCAGG ACAGCCTGCC GCAGTTCGGT
GCCCTCGCGC TCATCACGCT GATCACGCAG ACGTTCCTCT CGGGGCTGCT CACCATCGTG
GTGGGCAAGG CGGTGCTGGG CCACGCCATC GGTGTGAGGG AGGCGTGGGA GGAGCTGCGT
CCGCGGTTGC CCTCCCTGCT GGGGGTGACG TTGGTGGTGA CGGCGGCCGT CATGGTCGGC
AGCCTGCTGT TCATCGTGCC CGGCATCTGG CTGTACGGTC TGCTCAGTCT CGCCACCCCG
GCGCTCGTGC TCGAACGCGG ACGGCTGTCC GATGCGTTGC GTCGCTCGGT CACCCTCGTG
CGGGGTTCGT GGTGGCGGGT CTTCGGAGTC CTCGTCGCGG GTCTGTTGAT CACCTACGTG
GTCTCGTACC TGATCCAGTT GCCGTTCGGC ATCGCGATCG ACCCGGCGGC CTTCGAACGC
GGGTACACCC CCGAGGAACT GCTGCTCCGA GAGGTCGGTA GCGCCGTCGC CCGCACCGTC
ACCGTGCCCT TCCTCTCGGT CGTCACGGCG TTGCTCTACA TCGATCAGCG GATGCGTCGC
GAAGGGCTCG CCGACGAACT CGCCAGGGCT TCCCGCATGA AGTGA
 
Protein sequence
MSGSTGWSSS GGGTPGVIPL RPLLLGEILE GAVTTLRRHA GVVFGSSAVV ALISAVIYFG 
ADLWVFDATE PAPVIDTEAP PEEQLEQAMA QLQDSLPQFG ALALITLITQ TFLSGLLTIV
VGKAVLGHAI GVREAWEELR PRLPSLLGVT LVVTAAVMVG SLLFIVPGIW LYGLLSLATP
ALVLERGRLS DALRRSVTLV RGSWWRVFGV LVAGLLITYV VSYLIQLPFG IAIDPAAFER
GYTPEELLLR EVGSAVARTV TVPFLSVVTA LLYIDQRMRR EGLADELARA SRMK