| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06290 |
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| Symbol | |
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| ID | 8385967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 645378 |
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| End bp | 646454 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974726 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003132527 |
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| Protein GI | 257054695 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGC TTGACCTGCG TTCCGATCCC GTCGATCTCA CCGCCGCGCT CGTGGACATC
GAGAGTGTGT CCGGGGCCGA GGCCGGCATC GCCGATGCCG TGGAGGCCGC ACTGCGTGCT
CAGGCACCGC ACCTGGAGGT GGTGCGCAAC GGGGACGCCG TGCTGGCCAG GACCAACCTG
GGTAGGCCGT CCCGCATCGT GTTCGCCGGT CATCTCGACA CCGTGCCCGT CAACGACAAC
CTGCCGTCCA GGCGCACCGG TTCCGGTGAC GACGAGGTGC TGCACGGCCT CGGCAGTGTC
GACATGAAGG GTGGTGACGC CGTGTTCCTG CACCTCGCGG CGACCCTGCC GGAGCCGAGG
CACGACGTCA CGTTCGTGTT CTACGACTGT GAGGAGGTCG AGGCCGAGCG CAACGGCCTG
GGCCGCATCG AACGTGAACT GCCCGAGTGG TTGCGCGGCG ACCTCGCCGT CGTGGGCGAA
CCGTCGAACG CGGTGATCGA GGCGGGCTGC CAGGGCACCA TGAGGGTCGA ATTGCGTGTG
GAAGGTGTCC GGGCCCACAC CGCGCGGGCG TGGATGGGTT CGAACGCCAT CCACGCGCTG
GCCGAACCGT TGCGTCGGCT CGCGGAGTAC GAGGCCAGGG TCGTGGAGAT CGACGGCCTC
ACCTACCGGG AGGGGCTACA GGCGGTACGG ATCGAAGGTG GGGTGGCGGG CAACGTCGTA
CCCGACTCCG CCGTCCTGAC CGTGAACCAC CGTTTCGCGC CCGACGTGTC GCCCGAGCAG
GCCGAGGCCC GTCTGCGCAA GGTGTTCGAC GGCTACGAGC TCACCGTCGT CGACTGTTCA
CCCGGAGCGT TGCCGGGCCT GTCCGCGCCG GCGGCCGCGG AACTCGTCGC CGCCGCGGGA
GGACGGGTCG CGGCCAAACT CGGATGGACC GACGTGGCCC GGTTCGCCGC GCTCGGCATG
CCCGCCGTCA ACTTCGGGCC TGGCGATCCG ACTCTGGCCC ACACCAAACA GGAGCAGGTC
CGAGTGGTGG AAATTCGCCG CGTCGCGGAG GTGCTTCGTT CACTGTTGTC CGGGTGA
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| Protein sequence | MPSLDLRSDP VDLTAALVDI ESVSGAEAGI ADAVEAALRA QAPHLEVVRN GDAVLARTNL
GRPSRIVFAG HLDTVPVNDN LPSRRTGSGD DEVLHGLGSV DMKGGDAVFL HLAATLPEPR
HDVTFVFYDC EEVEAERNGL GRIERELPEW LRGDLAVVGE PSNAVIEAGC QGTMRVELRV
EGVRAHTARA WMGSNAIHAL AEPLRRLAEY EARVVEIDGL TYREGLQAVR IEGGVAGNVV
PDSAVLTVNH RFAPDVSPEQ AEARLRKVFD GYELTVVDCS PGALPGLSAP AAAELVAAAG
GRVAAKLGWT DVARFAALGM PAVNFGPGDP TLAHTKQEQV RVVEIRRVAE VLRSLLSG
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