Gene Svir_06220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06220 
Symbol 
ID8385960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp638781 
End bp639326 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID644974719 
ProductNUDIX family protein 
Protein accessionYP_003132520 
Protein GI257054688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.755665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGCC CCCTGCACAC CGAGGCGACC GCGACCCTGG AGGCGTGGAA ACCCGAAAGC 
GCCGCGCAGG AAGCGCTGCG GCAGAGCTAT CTCGGCTTCC TCGCCGCGCG TGAGGACGCG
TGCGAACGGT CGTGCGCGGC GGGACATCTC ACCGCCTCCA CCGTGGTGTT GGACGCCTCG
GGCGAGCACG TACTGCTGAC CCTGCACCCG CGGGTGGGCC GCTGGCTCCA GCTCGGCGGA
CACTGCGAAC CGGAGGACTC CTCACTGGCG GAGGCGGCGC TGCGGGAGGC CACGGAGGAG
TCGGGCATCA GCGGGCTCAG ACTCGTCCCC GAACCACTGC ACCTCGACGT GCATCCGGTG
ACGTGCTCGC TGGGTGTTCC CACCCGACAC TTCGACGTGC GGTTCGTGGC CATGGCCCCG
GAGGGTGCGC GGCCGGTGGT CAGCGACGAG TCCGAGGAGC TGCGGTGGTG GCCGGTGCGA
GAACTGCCAC CCGACTCCGA GGACCTCACC GAACTCATCG CCGCGGCCCT CGAAGCCAAA
CCCTGA
 
Protein sequence
MVSPLHTEAT ATLEAWKPES AAQEALRQSY LGFLAAREDA CERSCAAGHL TASTVVLDAS 
GEHVLLTLHP RVGRWLQLGG HCEPEDSSLA EAALREATEE SGISGLRLVP EPLHLDVHPV
TCSLGVPTRH FDVRFVAMAP EGARPVVSDE SEELRWWPVR ELPPDSEDLT ELIAAALEAK
P