Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06220 |
Symbol | |
ID | 8385960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 638781 |
End bp | 639326 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644974719 |
Product | NUDIX family protein |
Protein accession | YP_003132520 |
Protein GI | 257054688 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.755665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAGCC CCCTGCACAC CGAGGCGACC GCGACCCTGG AGGCGTGGAA ACCCGAAAGC GCCGCGCAGG AAGCGCTGCG GCAGAGCTAT CTCGGCTTCC TCGCCGCGCG TGAGGACGCG TGCGAACGGT CGTGCGCGGC GGGACATCTC ACCGCCTCCA CCGTGGTGTT GGACGCCTCG GGCGAGCACG TACTGCTGAC CCTGCACCCG CGGGTGGGCC GCTGGCTCCA GCTCGGCGGA CACTGCGAAC CGGAGGACTC CTCACTGGCG GAGGCGGCGC TGCGGGAGGC CACGGAGGAG TCGGGCATCA GCGGGCTCAG ACTCGTCCCC GAACCACTGC ACCTCGACGT GCATCCGGTG ACGTGCTCGC TGGGTGTTCC CACCCGACAC TTCGACGTGC GGTTCGTGGC CATGGCCCCG GAGGGTGCGC GGCCGGTGGT CAGCGACGAG TCCGAGGAGC TGCGGTGGTG GCCGGTGCGA GAACTGCCAC CCGACTCCGA GGACCTCACC GAACTCATCG CCGCGGCCCT CGAAGCCAAA CCCTGA
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Protein sequence | MVSPLHTEAT ATLEAWKPES AAQEALRQSY LGFLAAREDA CERSCAAGHL TASTVVLDAS GEHVLLTLHP RVGRWLQLGG HCEPEDSSLA EAALREATEE SGISGLRLVP EPLHLDVHPV TCSLGVPTRH FDVRFVAMAP EGARPVVSDE SEELRWWPVR ELPPDSEDLT ELIAAALEAK P
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