Gene Svir_06210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06210 
Symbol 
ID8385959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp637579 
End bp638451 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID644974718 
Productbiotin-dependent carboxylase-like protein 
Protein accessionYP_003132519 
Protein GI257054687 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.447378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCGG CGATACCGGC TGAACTGGAA GTGATGGAGC CGGGATTGTT GGCCACCGTG 
CAGGACCTCG GCCGTCCGGG GCTTGCGGGC ATCGGGGTCG GCGCCTCCGG CGCGGCCGAC
CGGACGTCCT TCCGGCTGGC GAACCGGCTC GTCGGCAATC CCGAGGACGC GGCGGCCGTG
GAGGTGACCT TCGGCGGGTT CGCGGCCCGA GCACGTCGCG ACCTCGTCGT CGCCGTCACG
GGCGCACCGT GCCCGGTCAC CGTGGGCGAC AGGCAAGGCG CGGTCAACAG CGTGTTGTTC
GTCCGGGCGG GGGAATGTCT ACGCCTGGGA AGGCCGGAGC GCGGCCTGCG CAGCTATGTG
GCCGTCCGTG GTGGGCTCGC CGTGGAACGG GTGCTCGGTT CGGCTTCCAC CGACGTGCTC
TCCGGGGTCG GACCACCGCC TTTGCGAACC GGCCACGTGC TGCCGGTCGG AATCCCGCGC
CTGCCGCTGC CGGACATCGG CTTCGCACCC GTGCCACCGC TGCCCGAGGA CGAACTGGTG
CTGCGGGTGG TGCCAGGGCC GCGGACCGAC TGGTTCGCCG ACGACGCACT GACCACGTTG
TTCGGTGAGT CGTATGAGGT GAGTTCCCGC AGCAACCGTA TCGGCATCCG GCTCGAGGGT
CCCGCGCTCC GCAGGACCCG TGCCGACGAA CTGCCGAGCG AGGGTATGGT TCCGGGCGCG
CTGCAAGTGC CCCCCTCGGG CAGGCCGACG TTGTTCCTCG CGGACCATCC CGTCACCGGC
GGCTACCCGG TGATCGCCGT GGTCGTGGCG AGCGATGTGG ACAAGGCCGC ACAGGCACGG
CCCGGGATGC GCATACGCTT CACGCCGCGC TGA
 
Protein sequence
MVSAIPAELE VMEPGLLATV QDLGRPGLAG IGVGASGAAD RTSFRLANRL VGNPEDAAAV 
EVTFGGFAAR ARRDLVVAVT GAPCPVTVGD RQGAVNSVLF VRAGECLRLG RPERGLRSYV
AVRGGLAVER VLGSASTDVL SGVGPPPLRT GHVLPVGIPR LPLPDIGFAP VPPLPEDELV
LRVVPGPRTD WFADDALTTL FGESYEVSSR SNRIGIRLEG PALRRTRADE LPSEGMVPGA
LQVPPSGRPT LFLADHPVTG GYPVIAVVVA SDVDKAAQAR PGMRIRFTPR