Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06180 |
Symbol | |
ID | 8385956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 634941 |
End bp | 636020 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974715 |
Product | Nucleoside-diphosphate-sugar pyrophosphorylase family protein |
Protein accession | YP_003132516 |
Protein GI | 257054684 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0622435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCCG TGTCGGGTGT CGATGCCGTG ATCCTGGTCG GGGGTAAGGG CACGCGGTTA CGTCCGCTGA CGCTGTCGGC ACCCAAGCCG ATGTTGCCCA CCGCGGGTGT TCCGTTCCTG TCCCACGTGC TCTCCCGCAT CCGTGCGGTG GGGATCACGC ACGTGGTGCT CGGTACGTCG TACCGGGCCG AGGTCTTCGA GGAACACTTC GGTGACGGCT CCGAGCTCGG GCTCGACATC GAGTACGTGG CGGAATCGGA ACCGCTGGAC ACGGGCGGGG CGATCCGCAA CGTCGCCGAT CGGCTGCGCA ACGACGACGT GGTGGTGTTC AACGGCGACA TCCTCTCCGG CGCGGACCTC GGTGCACTGG TGACCACGCA TCGCGAAGTG GCGGCCGACG TGACCCTGCA CCTCCAGCGG GTCGACGACC CGTCCCGGTT CGGCTCGGTC CCCACCGACG CCGACGGTCG GGTCACGGCG TTTCTGGAGA AGACCCCCAA TCCCCCCACC GACCAGATCA ACGCGGGCTG CTACGTGTTC CGGCGTTCGG TGATCGAGGA GATCCCGGCG GGCCGGCCGG TGTCCGTGGA ACGTGAAACG TTCCCCGGCC TGTTGGAGAG CGGTCGGCAC GTGCACGGCT TCGTCGACGA TTCGTACTGG CTCGACGTCG GGACCCCGGA GGCGTTCGTG CGCGGTTCGG CCGACCTGGT CACCGGTGTG GCCCCCACGG AAGCCCTGCC GGGACCCACG GGCGAGCGGC TCGTGCTCGA CGGTGCCTCG GTGGCCGACG ACGCCGTGGT CACCGACGGG TCGACGATCG GCGCGGGCGC GTACGTGGCC TCGAGCGCGC AGGTGCGCGG TTCGGTGCTG TTCGACGGCG CGTCGGTGGC CGAAGGGGCC GTGGTGGAGC GGTCGGTTCT CGGGAAGGGG GCGCGGGTCG GCAAGGGTGC CGTGTTGCGT GGGGTCGTCG TCGGGGACGG GGCGTCGGTG GGGGCCGACT GCGAACTGCT CGACGGCGCG CGGGTGTGGC CGGACGTCGA ACTGCCCGAG TCGGCGATCC GGTTCTCCAG CGATGCCTGA
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Protein sequence | MASVSGVDAV ILVGGKGTRL RPLTLSAPKP MLPTAGVPFL SHVLSRIRAV GITHVVLGTS YRAEVFEEHF GDGSELGLDI EYVAESEPLD TGGAIRNVAD RLRNDDVVVF NGDILSGADL GALVTTHREV AADVTLHLQR VDDPSRFGSV PTDADGRVTA FLEKTPNPPT DQINAGCYVF RRSVIEEIPA GRPVSVERET FPGLLESGRH VHGFVDDSYW LDVGTPEAFV RGSADLVTGV APTEALPGPT GERLVLDGAS VADDAVVTDG STIGAGAYVA SSAQVRGSVL FDGASVAEGA VVERSVLGKG ARVGKGAVLR GVVVGDGASV GADCELLDGA RVWPDVELPE SAIRFSSDA
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