| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06000 |
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| Symbol | |
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| ID | 8385938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 611791 |
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| End bp | 612333 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974697 |
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| Product | predicted membrane protein |
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| Protein accession | YP_003132498 |
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| Protein GI | 257054666 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2246] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.284035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTCG TCGAATCCGT TCTCGCCCGC GTGCCCGAAC CACTGCGCTC GGTGCTGGTC
AAGCACCGGG AACTGGTGAA GTTCGTGGTG GTCGGCAGTA CGACGTTCGT GGTCGACAAC
GGCATCTGGT ACCTGCTGAA GCTCACCATC CTGAACACGA AGCCGACCAC GGCCAAGGCC
ATCGCGATCC TCATCGCGAC CATCGTGTCC TACGTACTGA ACCGCGAGTG GTCCTTCCGG
ACCCGAGGAG GCCGGGAACG CGCCCACGAG GCCACACTGT TCTTCCTGGT CAGCGGCGTA
GCCGTCGCGA TCAACCTGGT CCCGCTCTAC ATGTCGCGGT ACGTGTTGAA CCTGGAAGTG
CCGCACGTGT CGCTGTTCGT CCAGGAGATC GCCGACTTCG CCAGTGGGTC GGTCATCGGC
ATGCTGTTGG CCATGGCGTT CCGCTTCTGG GGCTTCCGCC GCTGGGTGTT CCCCGACGAG
CTCGGTAGGA AGCGTCGCGA GACAACCACC GACGACGCGC CGACCACGGT CCCCCGGCAC
TAA
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| Protein sequence | MAVVESVLAR VPEPLRSVLV KHRELVKFVV VGSTTFVVDN GIWYLLKLTI LNTKPTTAKA
IAILIATIVS YVLNREWSFR TRGGRERAHE ATLFFLVSGV AVAINLVPLY MSRYVLNLEV
PHVSLFVQEI ADFASGSVIG MLLAMAFRFW GFRRWVFPDE LGRKRRETTT DDAPTTVPRH
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