Gene Svir_05840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05840 
Symbol 
ID8385922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp597235 
End bp597627 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content69% 
IMG OID644974681 
Productprotein of unknown function (DUF1707) 
Protein accessionYP_003132482 
Protein GI257054650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.98006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCG ACCGACCGAA TTACCGGCTC AGCGACGCTG AGCGGAAAGA AGCCCTGGAC 
GCGCTCGCCG AGCACGTCCG CACGGGTCGG CTCGACGTCG TCGAGTACGA CGAACGCTCC
GCCGTGGTCA GCGCGGCCAA GACCCGCCGG GAACTGGAAC CGGTGTTCTC CGACCTCCCC
GAGCCTCGGC CGAGCGTGTT GGCCGCGCCG ACGAGGTACG AACGGGACGG GGCCGTGCGG
TCGCAGCGAC GCCGGGGCCT GTCGATCACG GTGGCGGTGA TCGTGGGCTG TGCGTTGTTC
CTGCTGCTGC CCCGGCTCGG CTTGCTCGGA CTGCTGCTTC CCGTACTCAT CGCCGTCGTT
GTGGGAACAA TCATTTCCGG TCGGCTGCGC TGA
 
Protein sequence
MTVDRPNYRL SDAERKEALD ALAEHVRTGR LDVVEYDERS AVVSAAKTRR ELEPVFSDLP 
EPRPSVLAAP TRYERDGAVR SQRRRGLSIT VAVIVGCALF LLLPRLGLLG LLLPVLIAVV
VGTIISGRLR