Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_05840 |
Symbol | |
ID | 8385922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 597235 |
End bp | 597627 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644974681 |
Product | protein of unknown function (DUF1707) |
Protein accession | YP_003132482 |
Protein GI | 257054650 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.98006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTCG ACCGACCGAA TTACCGGCTC AGCGACGCTG AGCGGAAAGA AGCCCTGGAC GCGCTCGCCG AGCACGTCCG CACGGGTCGG CTCGACGTCG TCGAGTACGA CGAACGCTCC GCCGTGGTCA GCGCGGCCAA GACCCGCCGG GAACTGGAAC CGGTGTTCTC CGACCTCCCC GAGCCTCGGC CGAGCGTGTT GGCCGCGCCG ACGAGGTACG AACGGGACGG GGCCGTGCGG TCGCAGCGAC GCCGGGGCCT GTCGATCACG GTGGCGGTGA TCGTGGGCTG TGCGTTGTTC CTGCTGCTGC CCCGGCTCGG CTTGCTCGGA CTGCTGCTTC CCGTACTCAT CGCCGTCGTT GTGGGAACAA TCATTTCCGG TCGGCTGCGC TGA
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Protein sequence | MTVDRPNYRL SDAERKEALD ALAEHVRTGR LDVVEYDERS AVVSAAKTRR ELEPVFSDLP EPRPSVLAAP TRYERDGAVR SQRRRGLSIT VAVIVGCALF LLLPRLGLLG LLLPVLIAVV VGTIISGRLR
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