Gene Svir_05450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05450 
Symbol 
ID8385883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp551137 
End bp552186 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID644974642 
Producthypothetical protein 
Protein accessionYP_003132446 
Protein GI257054614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACTG ACAATCACCT CGCAGCCCCG TCCTTCGACC GGATGCGCAA CATGTTGGTG 
CGCGCGGCCG AGGTCCGAGA AAGCGAACAG CAGCAGATCT TCGACGCGCT GGACGACATC
TACGCGCGGC TCGCGCCGGT GGACTCGCTC GGCGCCGTCC GTAAGCGGCT CTCCGAGCTG
CCCGACCGGA CCGAGATGAG TGTCCTCGCG GAACGCCTCG ACGAGGCCAT GACCCGCTTG
GAGGCACAGG ACAACGCGCT GGCCGACCTC GCGCGGTCGG TGGAGGCGAT CGTCGACAAG
CTCGCCAAAC CGTTCGGGCA ACTGGACGGC CGACTCGATG GGGTCGCGGC CCGCTTCGAG
GGTGTCGCCG GCCGGATGGA CGGCCTCGAG GACAAACTCG CCAACATCCA CCGCAGGCTG
GACGAGTTGG GCAACCACCT CGACAAGCAG GACACCAAGC TCGACGCGGT TCCGGCGGCG
GTACAGGGTC CGCTGCGCGA ACGCATCGAC ACGTTGGAGA CGACGCTCAA GGAGCGGGTC
GAACGCCTCG ACTCCGACTC CAAGGAGCGG ATCACCGCGA GCACCGACAC GCTGCGCTCG
GCGATGACCG ACACCGCCGA GACGTTCGAC CCGTCCGCTC GACTCGACAC GCTGAACGAG
CGGCTGGAAC AGTTGGGCGA CAGGCTCGAC GCGCTGTCGG CCCGTCTCGA CAAGGTCGAG
GAGAACGTCG GCGCCCAGCT GGGCGACCTC GACGGCTCGA TCAAGTCGGG ACTGTCGAAG
GTCGAGGACA CGTTGGCGCA GCAGCCGGAC AACGAGCACT TCGCGGCTGT GGTGCGCAGG
AGCAACGAGG AATCCGAGCG GCGCATCGGC GGCCAGCTCG ACGAGGCGAT GGCCACGTTC
GCGGAGCTGA TGCTGGGTGG TGGCCCGGCG CCGCAGCCCG CGATCTCGGC CCCGCCCACG
CCGCGACAGC CTCGGCGCCG CAACGGCAGG TCCGCCAAGG GCTCGGACGC GAAGTCGAAG
TCCGGGGCGG ACGTCGACTC CGACGACTGA
 
Protein sequence
MTTDNHLAAP SFDRMRNMLV RAAEVRESEQ QQIFDALDDI YARLAPVDSL GAVRKRLSEL 
PDRTEMSVLA ERLDEAMTRL EAQDNALADL ARSVEAIVDK LAKPFGQLDG RLDGVAARFE
GVAGRMDGLE DKLANIHRRL DELGNHLDKQ DTKLDAVPAA VQGPLRERID TLETTLKERV
ERLDSDSKER ITASTDTLRS AMTDTAETFD PSARLDTLNE RLEQLGDRLD ALSARLDKVE
ENVGAQLGDL DGSIKSGLSK VEDTLAQQPD NEHFAAVVRR SNEESERRIG GQLDEAMATF
AELMLGGGPA PQPAISAPPT PRQPRRRNGR SAKGSDAKSK SGADVDSDD