| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05420 |
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| Symbol | |
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| ID | 8385880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 548191 |
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| End bp | 549375 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974639 |
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| Product | nucleoside ABC transporter membrane protein |
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| Protein accession | YP_003132443 |
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| Protein GI | 257054611 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.905807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGTGGG CCGTGGTGGC GATCTCGGTG CTGTCCACCA CGGCCTATCT GACCGGATTG
GACTCGCTCA CGTCGAGCAA CACCTCGCAG ACCGCGTTGC GCCTGGCGCT GCCGATCCTG
TTCGCCGCGC TCGGCGGGCT GTGGGCGGAA CGCGCGGGTG TCATCAACAT CGGGCTCGAG
GGCATGATGA TCCTCGGCAC GTGGGGTGCG GCCTGGGGCG CCTACTACGG GGGCGTCTGG
GCGGGTCTGC TCGCTGCCAT CCTGTTCGGT GCGCTCGGTG GGCTGCTCCA CGCGGTGGCG
ACGGTGACGT TCGGCGTCAA CCACATCGTG TCCGGTGTGG CCATCAACCT GCTCGGACTC
GGGGTGACGA AGTACCTCGC CAACATCGTG TTCGAGCCGT TGTCGGGTAA CCCGAGGCAG
TCGCCGCCCG TGCCGAAGTT CGAGACGTAC TCGGCGACGT TCCTCTCGGA TTGGCTCGCC
GAACTGGAAC AGGCCCAACG GGTCGGGATC TCCGACGCGG CGGGACTGTT GCACGGTCTG
GTCACGCAGG TCTCACCACT GGCCATGATC GCGCTGTTGT TGGTCCCACT CAGCTACCTC
GTGCTGTGGC GCACTCGGTT CGGGCTGCGG TTGCGGTCGT GCGGGGAGAA CCCGGTGGCG
GCCGAATCGC TCGGGGTCAA CGTGTACGTG CACAAGTACC TGGCCCTGCT GATCTCCGGG
GGACTCGCGG GAATGGGCGG TGCGTCCCTG GTGCTGCTGG CCGGCGGGGC CGACTACCTG
GAGAACCAGA CCAACGGCCG CGGTTACATC GGACTCGCGG CGATGATCTT CGGTAACTGG
CGGCCCGGCG GCCTGCTGGG TGGTGCGGCG CTTTTCGGTT ACTCCGACGG TCTCCAGCTG
TCGGCGGGCG GGGAGGCCGT GCTCGCGCTC TGCTACGGCG CGGTGCTGCT GCTCGCCGTG
ATCGCGGTGG TGCAACTGGT GCGGCGCCGG TGGCTGGCCG CCGCGTTGTC CGCTGTGGCC
GCCGGGGTCC TGTATTACGT TTACTGGGCC AACGACGAGT TGCCGCGCGA GCTGATCCCC
TACACGCCGC ACTTCGTGAC GATCATCATC TTGGCCGTGG CCGCACAGAA GCTGCGTCCG
CCGAAGGCGA TCGGCAAGCG GTACCGGCGT GGGGAGGATG ACTGA
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| Protein sequence | MLWAVVAISV LSTTAYLTGL DSLTSSNTSQ TALRLALPIL FAALGGLWAE RAGVINIGLE
GMMILGTWGA AWGAYYGGVW AGLLAAILFG ALGGLLHAVA TVTFGVNHIV SGVAINLLGL
GVTKYLANIV FEPLSGNPRQ SPPVPKFETY SATFLSDWLA ELEQAQRVGI SDAAGLLHGL
VTQVSPLAMI ALLLVPLSYL VLWRTRFGLR LRSCGENPVA AESLGVNVYV HKYLALLISG
GLAGMGGASL VLLAGGADYL ENQTNGRGYI GLAAMIFGNW RPGGLLGGAA LFGYSDGLQL
SAGGEAVLAL CYGAVLLLAV IAVVQLVRRR WLAAALSAVA AGVLYYVYWA NDELPRELIP
YTPHFVTIII LAVAAQKLRP PKAIGKRYRR GEDD
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