| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05300 |
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| Symbol | |
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| ID | 8385868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 534628 |
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| End bp | 535728 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974627 |
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| Product | ribonuclease, putative |
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| Protein accession | YP_003132431 |
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| Protein GI | 257054599 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTCAGG TGAAGGCGGA CGAGGGCAAG GGCACCAAGG GGGCGAAGGG CTCCGAAGAC
TCCCCTGGCG TCGCAGGTGT CAAGGACGCC AAGAGCGGTA AGGACGAGGA CAAGCTGCTG
CCCCGGCTGC GGAGGAAACA TCCGTGGCTG GACCACGTGA TCAGAGCCAA CGAGGCGTTC
ACCGAGCGGT TCGGCAACCA CTACGCCGCT GCCATCACGT ACTTCTCCGT CCTCTCGTTG
GTCCCCCTGT TGATGGTGGG TTTCTCCGTG GCCGGCTTCG TGTTGGCGGG CAACGACGTG
GCGATGCGGC AGCTGCGCGA GGGCATCGTC AACTCCGCCC CCGAGGGCTT GGGCGGTCTT
TTCACCTCCA TCGTCCAGGC GGCACTCGAT TCCCGTGCCG GTGCCGGAAT ACTCGGTCTG
CTGCTCGCCC TGTACTCCGG TCTCGGGTGG ATGGGCAACC TGCGTGACGC TCTGACCGTG
CAGTGGGGGC AGGAGAAGCC GAAACTGCCC TTTCTGTCCA CCAAGGTGAA GGACCTGGGG
GCGCTCGCCG GGCTCGGTGT GGCGTTGGCG GTGTCGTTCG GCCTCACCGC CGTCGGCAGT
GGGCTGGGTG AGTTCCTGCT CGAACTCATG GGTCTGGAGG ACGCGGCTTG GGCGCGGTTC
CTGCTCCGGC TCGGCACCAT CGTGTTGGCC TTGGCGGCCA ACGTGCTGGT GTTCTTGTGG
GTGCTGGCCT GGTTACCTCG GAAGAAGGTC GCGGTCCGCA ACGCCGTGAG AGGGGCGGTC
CTCGCCGCCG TCGGTTTCGA GGTGCTCAAG CAGGTCGGTG GTGTCTACCT GTCCAGCGTG
CTGAGTTCGC CCAGTGGCGC GCTGTTCGGT TCCGTGATCG GTCTGCTCGT GTTCGCCAAC
CTCGTCGCCC GGTTCCTGCT GTTCGCCACC GCGTGGGCGG CCACCGCGGA GGGGAACCTC
GTCACGCGCA CCGTGGAGCC ACCCGCACCC GCCGTGGTCA GGCCGACGGT GGAGGTGCGG
CGTGGCGGTG GTCCGGGTCT GGCCGTAGGG GCGTTCGGGG CCGGGGCCCT GTTGGCCTGG
CTCGCCAAAC GGCGCTCGTG A
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| Protein sequence | MGQVKADEGK GTKGAKGSED SPGVAGVKDA KSGKDEDKLL PRLRRKHPWL DHVIRANEAF
TERFGNHYAA AITYFSVLSL VPLLMVGFSV AGFVLAGNDV AMRQLREGIV NSAPEGLGGL
FTSIVQAALD SRAGAGILGL LLALYSGLGW MGNLRDALTV QWGQEKPKLP FLSTKVKDLG
ALAGLGVALA VSFGLTAVGS GLGEFLLELM GLEDAAWARF LLRLGTIVLA LAANVLVFLW
VLAWLPRKKV AVRNAVRGAV LAAVGFEVLK QVGGVYLSSV LSSPSGALFG SVIGLLVFAN
LVARFLLFAT AWAATAEGNL VTRTVEPPAP AVVRPTVEVR RGGGPGLAVG AFGAGALLAW
LAKRRS
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