| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05120 |
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| Symbol | |
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| ID | 8385850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 508003 |
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| End bp | 512229 |
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| Gene Length | 4227 bp |
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| Protein Length | 1408 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974609 |
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| Product | nuclease-like protein |
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| Protein accession | YP_003132413 |
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| Protein GI | 257054581 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.61882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATGCCGC AGGCGGAACC GTACCGAGCC TGGGCCACGT TCTCTTTCAC CGCGGCCTCC
GGTCGGATCA ATGAGTGCGA TCTGCTGATC GCGGTTCCCG GTGGGCTCTA TCTGGTGGAG
CTCAAAGGCC ATACCGGGCG TGTGGTGAAC AGCGGTGAGA CGTGGAGTTT CTTCAGGGAG
GGGGAAAAGC GGCCACGGAG GTTTCGCAAT CCGCTGCATC TCACCGACCT GAAGTGCAAG
GAACTCAAGC AGCGTTTGGA GTGGGCTGCC AAGCAGATCG GGTACAGCGG GCGGATACCG
TGGATCGAGC CGGCGATTTT CCTTTCCGCG CCCGGGTTGG TGTCGGAGCT CGACGAGGTG
CAGCGCACCC GCGTGTACGG CCGTGACGAA CAGGTCGAGG GGCTGGATTG GATTTGGCGT
GACCTGTTGT CGCGTCCACC GCAGCGGGAG CAGCAGCGGG TCAGCCCGAA GTTCTCACAG
CGGTTGCCGG AGCTGTTGAA GAAGATCGGC ATTCGGGCTT CGACGGCGCA CCTGCATTTC
GGTGATGACT GGGTGCTCTC CGACGAGGTG CTGGACGCGG GGCCGACGTG GGAGGACCGT
CTCGCCAAGC ACGCGGGGCC GGTGCGCGAT GAGGGTCGGG TCCGCATCTA CCTCACCGAG
CAGCAGGCCG TCGAGGAGCG GCGGCAGTCG GTGGAGCGGG CCGCGCGGCG TGAGTATCAG
GTGTTGCAGG GCATCATTCA CCGTGGCATC GCGCAGGCCA TGCAGTTCCG GGAGCATCAA
AGCGGTCCCG CGATCCTCTT CCGACACAAT TCGTCGGATC TGCGGTTGGA CTCCTATCTG
GAAATCCATG GTGAACGGCT CAGCATCGAG ACTCGGCTTG ACTTGGTGCG ACAGCTCGCC
GAGGCCGTGC AGTACGCCCA CCATCGCTCG CTCTACCACC GTGCCCTGTC GGCACGTTCG
GTGTGGGTTG CGGCCAAAGA GGATGGCTCC GATCCGGTGT TGCGGATCAC CGACTGGCAG
GCCGCTGCCC GTGACTTCGA TTCGACGTCG ACGGCGACGG TGGGTAAGAC GTCGTTGACC
GGGGAACATT TGGCCAGTTC GGCGGAGGTG TACCTGGCAC CGGAGTTCGC CCCACACGCC
GATCCGGTGG ACCTCGACGT CTTCGGCCTG GGCGCGGTGT CGTTCCTGAT CCTGACCGGG
CAGCCACCTG CCACACAGCG CAGCGGCCTC ATCGAACGGT TGGCCGAAAG CCAGGGGCTG
CATCCGTACG CGGTGTCGGA CGGTATTTCC GATGCGCTCG ACGCGTTGGT GTTCGACGCG
ACCCGTACGG ATCTGTCACA GCGGTTGGAG TCGGCGGATG CCTTCCTCAA GCGCTTGGAC
GCGGCGGAGT GGGAGTCGCT GCCCGAGTCC TCGGTGCCGG TGGTCGATCC GCTCACCGTG
TCGGCCGGGC AGATGGTGGA TGAGCAGTGG CGTGTTGAGC GGGTGCTCGG CACCGGTGCC
ACGGCGCGGG CTTTGCTGGT CCGCAGGGTG GACACCGACG ACGAACAGCC TGAGCGTCGG
GTCCTCAAGG TCGCGCTCGA CGAGGACAAG GCACAGCACC TGCACGCGGA GGCCCGAGCC
TTGGCGTTGG CGGGTGGCGG TGTGGTGGTG AAGCTGCTCG ACGGTCCTCG TGAGCTCGGT
GGTCGCACCG TGCTCGACTT GGAGTACGCG GGTGGTCAGG ACCCCCAGGG CTACACGTTG
GGCGAGTTGT TGCGCGCTGA GGGCAAGCTC AGCTACCACA ACTTGGAGCG TTATGGCCGC
GACTTGTTCA CCGCGTTGGA TCAGCTCGCG GGCAAGGGCG TGCGTCATCG GGATCTGAAG
CCGGACAACT TCGGCGTCTA CCGCAGGGCT GATCGGTCGA CGCAGTTGAT GTTGTTCGAC
TTCTCGCTGG CCGAGGCGTC GGAGCGCGAT GTCACGGCAG GCACACGCGG ATATCTGGAT
CCCTTCCTGG GCACCAATCG CCGTCCCGCC TACGACGATC ACGCCGAGCG CTATGCGGCG
GCGGTGACAT TGCATGAGAT GGCATCCGGT CAGCGACCGG TGTGGGGTGA CGGGGTCAGT
GATCCTCGCA CGACCGGTGA TGAGCTGCCC GTGCTCGCGG TCGAGCTGTT CGAGCCGGCG
TTGCGTGACG GATTGACGGA GTTCTTCCAG CGTGCGCTGC ATCGGGATGT CAATCGCCGG
TTCGACACGT TGCGGCAGAT GGAGGACGCC TGGCGCGAGG TGTTCACCGC GGCGGATACC
GCCCAGCCAC TCACCACTCC GGACACGGTG GGCATCGAAG GTAAGACGCT GGAGGAAGCC
CGCGACTTCT ACGCCGAGAA GGCGACCTTG GACACGCAGC TCGACGTGGC CGGGCTGAGC
CCGCGCGCGG TGTCGTTGGC GCAGTCGCTT GGTGCTACGA CGGTGCGGGA ATTGTTGGAG
CAGGTGCGGC CGTATGAGAT CAGTCGAGCG CGCGGTGCGG GCAAGGTGGT GCGCAACGAG
CTGAACCGCC GGTACAAGCA GTGGACGCGG GCGCTGTCGC TGCAGGACGA GCCTGACCGG
CCGGCCCCGG AGGCCACGCC CGGTTTGTCC ACTGTGGATG ATTTTGTTGC GTGGTTGGTG
CCGCAGAAGG CGCGGAGGGG TTCGCGCAAG GCCGATGTCG TGCGGTTGAC GCTCGGGTTG
CCGGAGGGGG ACGACGATGA GCTACTGCGG TGGCCGACGC AGACCGAGGT CGCCCGGCGG
CTGGAGATCA CGCAGGGCAC GGTGTCGCAG CATTACCGCG CGGCAGTGAA GGCGTGGGCG
GCCGAGCCGT GGCTGTCGAG GGTGCGCGAC GAGTTGGTGG AGCTGGTCGC CGAGGCGGGC
CGGGTGATGA CGGCGCACGA GCTGGCGGCC GCGGTGAGAG CCAAGTACGG AGTCGCGGAG
CCGGAGGCTC GAGAACGTGC CTTGGCGAGG TCGTTGGCGG TGGTGCGTGC GGCGGTGGAC
ACCGAGGCGT GGGAGCGGCA ACAGGATGAG GACGAGGACG AGGAAGGCCC ACGGTTCTCG
GCGTTGCGGC GTGGCGATCA CGTGTTGATT GCGTTGGAGT CTTTGCCGGG CACCGACGCA
CCGAGCGCTC CGGAGTTGGC TGACTACGCC GTGGCGTTGG GGGCGCGGGC CGATGAGCTG
GTGGCCATGG ACCCGCTTCC CGGCCGAGGC GTGGTGGTGC GGGAGTTGCG GGCGGTGCCG
GCTCCGGAGG GGCTGCCCTC GCAGGCGGAT ACGCGTCTTG TGGAGTTGGC CGCGGTGATG
TCGCAGCGGG CGGCGGCGTC GGCGCGCGCG GAGCTGTATC CCCGGGAGTT GGATATGGTG
CGCGCGCTGC GCATGTCGCA GGCCGCGGTG GGGGTGCGTC GTGAAACGGG GATCACGCGC
GAAGCCCTGT TGGCGAAGGT GCGTGCGCGG TTCCCGGCCG TGGTGGTGGA TGACCAGACC
TCGGAAGTGC AGCTGGAGGA GGCGCTGCGC GCGGCGGGGA CCCCGTTGGA ATGGGATACG
GAGACGAAGC GGTTCCGGCC GCCGGAACCG AAGTTCTCCC GTTCGGCCGT GTCGTCCAGT
ACGAGCCGAA GTGGTCACGG TCCGCTGTTC TCCGGTGGTG TGGACCCACG GGAGGTGTTG
GGCGGGAAAC TCGTCAGGGC GGGGGAGCAC GGCGGGTTCT TGGCGTTGAC GCTGCGGGGG
GTGTATCTGC CGGGAGTCGC CGAGGCGTTG GCGTCGCGGT ATGCGGTGCA CCCGGTGCAC
GTGGACAGCG AGTTTGTGGC GACATTCCGT GAGTTGATCG CCGAGCGCGG CCAGGACTGG
GAGCTGGTGC GCAGGTTGGA CGCCGGCTTC GGGCGGACGG GGCTACCGAA GCCGGGTTTC
CGCGAGTATG TGCGGAAGGT GTGGGAGCGG CTGCGGGACC GGTTGGTGGC GGTCGGGGGT
GAACGCACGG TGCTGTTGCT GCACCATGCG GGTTTGGTGG GCCGCTATGC CGACCTGGGT
GGGCGCGAGT TCTTGACAAG TTTGCAGCAG GCGGCCCGTT CAGCGAGCGC GAAGCCGCAT
GGTTTGTGGG TGTTGTGTCC GGGCGAGTCG GCGCGGGAAG CACCTCAGCT CGACGGTCTG
CGTGTCGAAG CGTTGACGGA GTCGGAGCGG GTGGTGTTGG ACAAGGATTT CCTGCGTGAT
TTGCAGGTGG TTGATCAGGC GAGCTGA
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| Protein sequence | MMPQAEPYRA WATFSFTAAS GRINECDLLI AVPGGLYLVE LKGHTGRVVN SGETWSFFRE
GEKRPRRFRN PLHLTDLKCK ELKQRLEWAA KQIGYSGRIP WIEPAIFLSA PGLVSELDEV
QRTRVYGRDE QVEGLDWIWR DLLSRPPQRE QQRVSPKFSQ RLPELLKKIG IRASTAHLHF
GDDWVLSDEV LDAGPTWEDR LAKHAGPVRD EGRVRIYLTE QQAVEERRQS VERAARREYQ
VLQGIIHRGI AQAMQFREHQ SGPAILFRHN SSDLRLDSYL EIHGERLSIE TRLDLVRQLA
EAVQYAHHRS LYHRALSARS VWVAAKEDGS DPVLRITDWQ AAARDFDSTS TATVGKTSLT
GEHLASSAEV YLAPEFAPHA DPVDLDVFGL GAVSFLILTG QPPATQRSGL IERLAESQGL
HPYAVSDGIS DALDALVFDA TRTDLSQRLE SADAFLKRLD AAEWESLPES SVPVVDPLTV
SAGQMVDEQW RVERVLGTGA TARALLVRRV DTDDEQPERR VLKVALDEDK AQHLHAEARA
LALAGGGVVV KLLDGPRELG GRTVLDLEYA GGQDPQGYTL GELLRAEGKL SYHNLERYGR
DLFTALDQLA GKGVRHRDLK PDNFGVYRRA DRSTQLMLFD FSLAEASERD VTAGTRGYLD
PFLGTNRRPA YDDHAERYAA AVTLHEMASG QRPVWGDGVS DPRTTGDELP VLAVELFEPA
LRDGLTEFFQ RALHRDVNRR FDTLRQMEDA WREVFTAADT AQPLTTPDTV GIEGKTLEEA
RDFYAEKATL DTQLDVAGLS PRAVSLAQSL GATTVRELLE QVRPYEISRA RGAGKVVRNE
LNRRYKQWTR ALSLQDEPDR PAPEATPGLS TVDDFVAWLV PQKARRGSRK ADVVRLTLGL
PEGDDDELLR WPTQTEVARR LEITQGTVSQ HYRAAVKAWA AEPWLSRVRD ELVELVAEAG
RVMTAHELAA AVRAKYGVAE PEARERALAR SLAVVRAAVD TEAWERQQDE DEDEEGPRFS
ALRRGDHVLI ALESLPGTDA PSAPELADYA VALGARADEL VAMDPLPGRG VVVRELRAVP
APEGLPSQAD TRLVELAAVM SQRAAASARA ELYPRELDMV RALRMSQAAV GVRRETGITR
EALLAKVRAR FPAVVVDDQT SEVQLEEALR AAGTPLEWDT ETKRFRPPEP KFSRSAVSSS
TSRSGHGPLF SGGVDPREVL GGKLVRAGEH GGFLALTLRG VYLPGVAEAL ASRYAVHPVH
VDSEFVATFR ELIAERGQDW ELVRRLDAGF GRTGLPKPGF REYVRKVWER LRDRLVAVGG
ERTVLLLHHA GLVGRYADLG GREFLTSLQQ AARSASAKPH GLWVLCPGES AREAPQLDGL
RVEALTESER VVLDKDFLRD LQVVDQAS
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