Gene Svir_05000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05000 
Symbol 
ID8385838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp499084 
End bp499938 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content68% 
IMG OID644974598 
Productmethenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (NADP+) 
Protein accessionYP_003132402 
Protein GI257054570 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCAA CGATTCTCGA CGGCAGGGCG ACCAAGGACG CGATCTTCGC CGAGCTGACA 
CCACGGGTGT CGGCTCTGAC CGAGCAGGGA CGTACGCCTG GTCTGGCGAC GGTGCTCGTC
GGGGACGATC CCGGCTCGCA CGCGTACGTG AAGATGAAGC ACGCCGACTG CGCCAAGGTG
GGGATCAACT CGATCCGCAG AGACCTCCCC AGCGACATCT CCCAGGAGGA ACTGTTCGCC
GTCGTCGATG AGCTGAACGC CGACCCCGCC TGCTCCGGTT ACATCGTGCA GTTGCCGTTG
CCGAAACACC TCGACGAGAA CGCGGTGTTG CAGCGGATCG ACCCGGCCAA GGACGTCGAC
GGGCTCGCCC CGTTGAGTCT GGGCAACCTG GTGTTGAACG AACCGGGGTT CCGGCCCTGC
ACACCCGCGG GGATCATCGA ATTGCTGCGC CGGTACGAGG TGCCGCTAAA CGGCGCGCAG
GTGACGGTCG TGGGCCGGGG CCTCACCGTG GGGCGCACGC TCGGACTGTT GCTGACCCGC
CGGGACGTCA ACGCCACTGT GACGCTGTGC CACACGGGTA CCCGCGACCT CGCGGCGGAG
GTCCGCAGGG CTGACGTGGT CATCGCGGCG GCCGGATCGC CGGGGCTCAT CACGCCTGAC
ATGGTGCGTC CGGGTGCGGC CGTGCTCGAC GTCGGTGTCT CCCGCGTCGA CGGCAAACTC
ACCGGTGACG TCGCACCCGA GGTGGCCGAG GTGGCCGGTT TCCTCGCCCC CAACCCGGGT
GGGGTGGGGC CGATGACCAG AGCGATGTTG GTGTCCAACG TCGTCGAGGC CGCCGAACGG
ACCGTCCGGC GGTGA
 
Protein sequence
MTATILDGRA TKDAIFAELT PRVSALTEQG RTPGLATVLV GDDPGSHAYV KMKHADCAKV 
GINSIRRDLP SDISQEELFA VVDELNADPA CSGYIVQLPL PKHLDENAVL QRIDPAKDVD
GLAPLSLGNL VLNEPGFRPC TPAGIIELLR RYEVPLNGAQ VTVVGRGLTV GRTLGLLLTR
RDVNATVTLC HTGTRDLAAE VRRADVVIAA AGSPGLITPD MVRPGAAVLD VGVSRVDGKL
TGDVAPEVAE VAGFLAPNPG GVGPMTRAML VSNVVEAAER TVRR