Gene Svir_04880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04880 
Symbol 
ID8385826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp481635 
End bp481922 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content68% 
IMG OID644974586 
Productmonofunctional chorismate mutase 
Protein accessionYP_003132390 
Protein GI257054558 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01808] monofunctional chorismate mutase, high GC gram positive type 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC AGGCTCACAG CACCGACTCC CCCGGTCCCA CCACGACCGA GAACATAGAC 
GAGCTCCGCA AGGAGATCGA CTGGCTCGAC TCCGAGATCC TGCGATTGGT GAAGCGCCGA
GCCGAGGTGT CGCAAACGAT CGGGAGGGTC CGGATGGCCG CCGGCGGCCC CCGCATCGTC
TACAACCGCG AGATGGACGT CCTCGCGCGC TACCGGGAAC TCGGCCCCGA GGGCAGGCAA
CTCGCGATGG CGCTGCTCAA CCTCGGCAGG GGACGGCTGG GACGCTGA
 
Protein sequence
MNAQAHSTDS PGPTTTENID ELRKEIDWLD SEILRLVKRR AEVSQTIGRV RMAAGGPRIV 
YNREMDVLAR YRELGPEGRQ LAMALLNLGR GRLGR